RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 BCL6P41182 706 aa7.41□□□□□ -1.22
EPHA4-204ENST00000415749 NEK3P51956 506 aa7.41□□□□□ -1.22
EPHA4-204ENST00000415749 HUNKP57058 714 aa7.41□□□□□ -1.22
EPHA4-204ENST00000415749 KIF23Q02241 960 aaPredicted RBP7.41□□□□□ -1.22
EPHA4-204ENST00000415749 MORC3Q14149 939 aa7.41□□□□□ -1.22
EPHA4-204ENST00000415749 SART3Q15020 963 aaKnown RBP7.41□□□□□ -1.22
EPHA4-204ENST00000415749 CLEC4GQ6UXB4 293 aa7.41□□□□□ -1.22
EPHA4-204ENST00000415749 CBLL1Q75N03 491 aa7.41□□□□□ -1.22
EPHA4-204ENST00000415749 NLRX1Q86UT6 975 aa7.41□□□□□ -1.22
EPHA4-204ENST00000415749 SCYL1Q96KG9 808 aa7.41□□□□□ -1.22
EPHA4-204ENST00000415749 PPCSQ9HAB8 311 aa7.41□□□□□ -1.22
EPHA4-204ENST00000415749 SP110Q9HB58 689 aa7.41□□□□□ -1.22
EPHA4-204ENST00000415749 RNF186Q9NXI6 227 aa7.41□□□□□ -1.22
EPHA4-204ENST00000415749 SAGE1Q9NXZ1 904 aa7.41□□□□□ -1.22
EPHA4-204ENST00000415749 GPRC5DQ9NZD1 345 aa7.41□□□□□ -1.22
EPHA4-204ENST00000415749 MARCH2Q9P0N8 246 aa7.41□□□□□ -1.22
EPHA4-204ENST00000415749 USP25Q9UHP3 1055 aa7.41□□□□□ -1.22
EPHA4-204ENST00000415749 COA3Q9Y2R0 106 aaPredicted RBP7.41□□□□□ -1.22
EPHA4-204ENST00000415749 COL11A2P13942 1736 aaPredicted RBP7.41□□□□□ -1.22
EPHA4-204ENST00000415749 NOTOA8MTQ0 251 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 B4E1Z4 1266 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 FAM47E-STBD1D6RA91 191 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 MSCO60682 206 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 SNUPNO95149 360 aaKnown RBP7.4□□□□□ -1.22
EPHA4-204ENST00000415749 CRTAMO95727 393 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 U2AF1L5P0DN76 240 aaPredicted RBP7.4□□□□□ -1.22
EPHA4-204ENST00000415749 PNLIPP16233 465 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 TRHRP34981 398 aaPredicted RBP7.4□□□□□ -1.22
EPHA4-204ENST00000415749 IL2P60568 153 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 U2AF1Q01081 240 aaKnown RBP eCLIP7.4□□□□□ -1.22
EPHA4-204ENST00000415749 MVKQ03426 396 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 PAK1Q13153 545 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 PKN2Q16513 984 aaKnown RBP7.4□□□□□ -1.22
EPHA4-204ENST00000415749 RGMBQ6NW40 437 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 ZCCHC8Q6NZY4 707 aaKnown RBP7.4□□□□□ -1.22
EPHA4-204ENST00000415749 CEP68Q76N32 757 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 NXPE1Q8N323 547 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 TRMT2BQ96GJ1 504 aaKnown RBP7.4□□□□□ -1.22
EPHA4-204ENST00000415749 FUBP3Q96I24 572 aaKnown RBP eCLIP7.4□□□□□ -1.22
EPHA4-204ENST00000415749 PLCD4Q9BRC7 762 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 CLDND1Q9NY35 253 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 ADGRE2Q9UHX3 823 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 RWDD3Q9Y3V2 267 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 DAAM1Q9Y4D1 1078 aa7.4□□□□□ -1.22
EPHA4-204ENST00000415749 SCN11AQ9UI33 1791 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 ANKRD26Q9UPS8 1709 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 ZNF891A8MT65 544 aaPredicted RBP7.39□□□□□ -1.23
EPHA4-204ENST00000415749 C22orf46C9J442 243 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 FUCA1P04066 466 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 GRK2P25098 689 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 IL13P35225 146 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 GRK3P35626 688 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 CXCL9Q07325 125 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 PICALMQ13492 652 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 MTHFSDQ2M296 383 aaKnown RBP7.39□□□□□ -1.23
EPHA4-204ENST00000415749 GRAMD1BQ3KR37 738 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 MINDY4Q4G0A6 757 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 TIGD5Q53EQ6 642 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 MROH9Q5TGP6 573 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 ZNF790Q6PG37 636 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 ZC3H7AQ8IWR0 971 aaKnown RBP7.39□□□□□ -1.23
EPHA4-204ENST00000415749 SPICE1Q8N0Z3 855 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 Q8N1Y9 231 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 CBARPQ8N350 705 aaPredicted RBP7.39□□□□□ -1.23
EPHA4-204ENST00000415749 PJA1Q8NG27 643 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 PANK1Q8TE04 598 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 PPM1EQ8WY54 764 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 DPF3Q92784 378 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 MENTQ9BUN1 341 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 SARGQ9BW04 601 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 SAMD15Q9P1V8 674 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 NIP7Q9Y221 180 aaKnown RBP eCLIP7.39□□□□□ -1.23
EPHA4-204ENST00000415749 ZNF652Q9Y2D9 606 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 PCDHA9Q9Y5H5 950 aa7.39□□□□□ -1.23
EPHA4-204ENST00000415749 HEG1Q9ULI3 1381 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 ARVCFO00192 962 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 TCERG1O14776 1098 aaKnown RBP7.38□□□□□ -1.23
EPHA4-204ENST00000415749 GSTA4O15217 222 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 PPIP5K2O43314 1243 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 MT-CO1P00395 513 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 FGAP02671 866 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 SOD2P04179 222 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 PF4V1P10720 104 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 ADCYAP1R1P41586 468 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 GMPSP49915 693 aaPredicted RBP7.38□□□□□ -1.23
EPHA4-204ENST00000415749 KCNMB1Q16558 191 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 FAM47CQ5HY64 1035 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 BICRALQ6AI39 1079 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 MORC1Q86VD1 984 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 TEX2Q8IWB9 1127 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 Q8N3U1 123 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 C2orf69Q8N8R5 385 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 FMNL2Q96PY5 1086 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 NAP1L4Q99733 375 aaKnown RBP7.38□□□□□ -1.23
EPHA4-204ENST00000415749 MTA3Q9BTC8 594 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 RNF32Q9H0A6 362 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 SLC6A17Q9H1V8 727 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 PTPRHQ9HD43 1115 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 HDAC9Q9UKV0 1011 aa7.38□□□□□ -1.23
EPHA4-204ENST00000415749 ZBTB21Q9ULJ3 1066 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms