RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 SYNCQ9H7C4 482 aa21.94■■□□□ 1.1
AP1S3-205ENST00000415298 CTDP1Q9Y5B0 961 aaPredicted RBP21.94■■□□□ 1.1
AP1S3-205ENST00000415298 ENC1O14682 589 aa21.93■■□□□ 1.1
AP1S3-205ENST00000415298 ATP1A1P05023 1023 aaKnown RBP21.93■■□□□ 1.1
AP1S3-205ENST00000415298 FOSBP53539 338 aa21.93■■□□□ 1.1
AP1S3-205ENST00000415298 C2orf54Q08AI8 447 aa21.93■■□□□ 1.1
AP1S3-205ENST00000415298 FAM133BQ5BKY9 247 aaKnown RBP21.93■■□□□ 1.1
AP1S3-205ENST00000415298 KLC3Q6P597 504 aa21.93■■□□□ 1.1
AP1S3-205ENST00000415298 DNAJC9Q8WXX5 260 aa21.93■■□□□ 1.1
AP1S3-205ENST00000415298 DHTKD1Q96HY7 919 aaPredicted RBP21.93■■□□□ 1.1
AP1S3-205ENST00000415298 AIFM3Q96NN9 605 aa21.93■■□□□ 1.1
AP1S3-205ENST00000415298 GJB4Q9NTQ9 266 aa21.93■■□□□ 1.1
AP1S3-205ENST00000415298 PRELID1Q9Y255 219 aa21.93■■□□□ 1.1
AP1S3-205ENST00000415298 TTLL3Q9Y4R7 772 aa21.93■■□□□ 1.1
AP1S3-205ENST00000415298 CALM1P0DP23 149 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 CALM2P0DP24 149 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 CALM3P0DP25 149 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 PORP16435 677 aaPredicted RBP21.92■■□□□ 1.1
AP1S3-205ENST00000415298 CACNA2D1P54289 1103 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 HPCAP84074 193 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 PDE1BQ01064 536 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 GRM4Q14833 912 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 TTBK2Q6IQ55 1244 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 KRI1Q8N9T8 703 aaKnown RBP21.92■■□□□ 1.1
AP1S3-205ENST00000415298 TUBE1Q9UJT0 475 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 TMX2Q9Y320 296 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 ZHX2Q9Y6X8 837 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 KDM1AO60341 852 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 KRT16P08779 473 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 ZNF131P52739 623 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 FUT2Q10981 343 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 TRPM8Q7Z2W7 1104 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 HINFPQ9BQA5 517 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 ETNK2Q9NVF9 386 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 INTUQ9ULD6 942 aa21.92■■□□□ 1.1
AP1S3-205ENST00000415298 ITGBL1O95965 494 aaPredicted RBP21.91■■□□□ 1.1
AP1S3-205ENST00000415298 NDUFB10O96000 172 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 CALB2P22676 271 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 PDE6CP51160 858 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 RCAN1P53805 252 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 LMNB2Q03252 620 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 SPP2Q13103 211 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 SLFN13Q68D06 897 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 WDR75Q8IWA0 830 aaKnown RBP21.91■■□□□ 1.1
AP1S3-205ENST00000415298 SLC7A5P1Q8MH63 180 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 MREGQ8N565 214 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 HAUS1Q96CS2 278 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 SLC26A6Q9BXS9 759 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 TMBIM4Q9HC24 238 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 SNCAIPQ9Y6H5 919 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 NID2Q14112 1375 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 BACH1O14867 736 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 CYTH3O43739 400 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 SNHG28P0DPA3 235 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 FECHP22830 423 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 CCNFP41002 786 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 RAD23BP54727 409 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 TMTC3Q6ZXV5 915 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 DQX1Q8TE96 717 aaKnown RBP21.91■■□□□ 1.1
AP1S3-205ENST00000415298 UCMAQ8WVF2 138 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 LLPHQ9BRT6 129 aaKnown RBP21.91■■□□□ 1.1
AP1S3-205ENST00000415298 BHMT2Q9H2M3 363 aa21.91■■□□□ 1.1
AP1S3-205ENST00000415298 KIAA1522Q9P206 1035 aaPredicted RBP21.91■■□□□ 1.1
AP1S3-205ENST00000415298 ZMYND8Q9ULU4 1186 aaPredicted RBP21.91■■□□□ 1.1
AP1S3-205ENST00000415298 KLRF2D3W0D1 207 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 SLC16A2P36021 539 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 TMTC1Q8IUR5 882 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 CCNJLQ8IV13 435 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 MAP7D3Q8IWC1 876 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 LRRC1Q9BTT6 524 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 PPP1R12CQ9BZL4 782 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 ARHGEF38Q9NXL2 777 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 TRIM75PA6NK02 468 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 PDE2AO00408 941 aaPredicted RBP21.9■■□□□ 1.1
AP1S3-205ENST00000415298 SPATA31D3P0C874 917 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 RARAP10276 462 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 IFNAR1P17181 557 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 HOXD10P28358 340 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 IREB2P48200 963 aaKnown RBP21.9■■□□□ 1.1
AP1S3-205ENST00000415298 ITIH3Q06033 890 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 SYDE2Q5VT97 1194 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 SPATA31D4Q6ZUB0 917 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 SYT2Q8N9I0 419 aaPredicted RBP21.9■■□□□ 1.1
AP1S3-205ENST00000415298 CCDC51Q96ER9 411 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 CHMP6Q96FZ7 201 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 ELP3Q9H9T3 547 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 RNPEPL1Q9HAU8 725 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 VAT1LQ9HCJ6 419 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 ARHGEF3Q9NR81 526 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 CARD8Q9Y2G2 431 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 LRCH1Q9Y2L9 728 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 V9GY48 417 aaPredicted RBP21.9■■□□□ 1.1
AP1S3-205ENST00000415298 ITIH6Q6UXX5 1313 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 DOCK1Q14185 1865 aa21.9■■□□□ 1.1
AP1S3-205ENST00000415298 VAV2P52735 878 aa21.89■■□□□ 1.1
AP1S3-205ENST00000415298 RBL2Q08999 1139 aa21.89■■□□□ 1.1
AP1S3-205ENST00000415298 CHADLQ6NUI6 762 aa21.89■■□□□ 1.1
AP1S3-205ENST00000415298 NEPROQ6NW34 567 aa21.89■■□□□ 1.1
AP1S3-205ENST00000415298 RNF10Q8N5U6 811 aaKnown RBP21.89■■□□□ 1.1
AP1S3-205ENST00000415298 KLHL29Q96CT2 875 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms