RNA–Protein interactions for RNA: ENST00000415188.1

USP4-203, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3 BASIC

Gene USP4, Length 1,454 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-203ENST00000415188 NR3C1P04150 777 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 OAS2P29728 719 aaKnown RBP16.15■□□□□ 0.18
USP4-203ENST00000415188 TLE2Q04725 743 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 EPHA7Q15375 998 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 SLC18A3Q16572 532 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 TKFCQ3LXA3 575 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 CEP55Q53EZ4 464 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 RINT1Q6NUQ1 792 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 ZNF771Q7L3S4 317 aaPredicted RBP16.15■□□□□ 0.18
USP4-203ENST00000415188 NIPA1Q7RTP0 329 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 TRIM43Q96BQ3 446 aaPredicted RBP16.15■□□□□ 0.18
USP4-203ENST00000415188 NACC1Q96RE7 527 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 MKNK1Q9BUB5 465 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 RUSC1Q9BVN2 902 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 KATNBL1Q9H079 304 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 ABHD16BQ9H3Z7 469 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 ABCB6Q9NP58 842 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 JADE2Q9NQC1 790 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 PNMA2Q9UL42 364 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 CCPG1Q9ULG6 757 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 ODF2LQ9ULJ1 636 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 TFR2Q9UP52 801 aa16.15■□□□□ 0.18
USP4-203ENST00000415188 EML1O00423 815 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 GAS7O60861 476 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 DUSP11O75319 330 aaKnown RBP16.14■□□□□ 0.17
USP4-203ENST00000415188 MYBP10242 640 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 HOXD13P35453 343 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 CASP5P51878 434 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 GHRHRQ02643 423 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 RAD51AP2Q09MP3 1159 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 C1orf53Q5VUE5 145 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 C1orf186Q6ZWK4 172 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 KLHDC9Q8NEP7 349 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 RIT2Q99578 217 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 TEKT3Q9BXF9 490 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 MLXIPQ9HAP2 919 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 NLRC4Q9NPP4 1024 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 PRDM4Q9UKN5 801 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 CAPN6Q9Y6Q1 641 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 DUSP10Q9Y6W6 482 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 ASTN1O14525 1302 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 LTBP2Q14767 1821 aa16.14■□□□□ 0.17
USP4-203ENST00000415188 GCNT3O95395 438 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 MOCS3O95396 460 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 ZNF131P52739 623 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 ACLYP53396 1101 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 CYP4A11Q02928 519 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 KLHL30Q0D2K2 578 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 RAPGEF1Q13905 1077 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 KCNA10Q16322 511 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 CCSAPQ6IQ19 270 aaPredicted RBP16.13■□□□□ 0.17
USP4-203ENST00000415188 GBP6Q6ZN66 633 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 Q7L0L9 218 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 FMNL3Q8IVF7 1028 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 CYP2W1Q8TAV3 490 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 GOLGA5Q8TBA6 731 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 BADQ92934 168 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 UIMC1Q96RL1 719 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 PARVGQ9HBI0 331 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 MYH11P35749 1972 aa16.13■□□□□ 0.17
USP4-203ENST00000415188 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.12■□□□□ 0.17
USP4-203ENST00000415188 PQBP1O60828 265 aaKnown RBP16.12■□□□□ 0.17
USP4-203ENST00000415188 PRPF6O94906 941 aaKnown RBP16.12■□□□□ 0.17
USP4-203ENST00000415188 SLITRK3O94933 977 aa16.12■□□□□ 0.17
USP4-203ENST00000415188 ICAM1P05362 532 aa16.12■□□□□ 0.17
USP4-203ENST00000415188 C6orf222P0C671 652 aaPredicted RBP16.12■□□□□ 0.17
USP4-203ENST00000415188 PRKCIP41743 596 aa16.12■□□□□ 0.17
USP4-203ENST00000415188 HSD17B4P51659 736 aa16.12■□□□□ 0.17
USP4-203ENST00000415188 GFPT1Q06210 699 aaPredicted RBP16.12■□□□□ 0.17
USP4-203ENST00000415188 MYBPC2Q14324 1141 aa16.12■□□□□ 0.17
USP4-203ENST00000415188 NAB2Q15742 525 aa16.12■□□□□ 0.17
USP4-203ENST00000415188 EXOC3L4Q17RC7 722 aa16.12■□□□□ 0.17
USP4-203ENST00000415188 KLHDC7AQ5VTJ3 777 aa16.12■□□□□ 0.17
USP4-203ENST00000415188 DPY19L2P1Q6NXN4 242 aa16.12■□□□□ 0.17
USP4-203ENST00000415188 B3GNT9Q6UX72 402 aa16.12■□□□□ 0.17
USP4-203ENST00000415188 NSMFQ6X4W1 530 aa16.12■□□□□ 0.17
USP4-203ENST00000415188 DYDC2Q96IM9 177 aa16.12■□□□□ 0.17
USP4-203ENST00000415188 CAPZA3Q96KX2 299 aa16.12■□□□□ 0.17
USP4-203ENST00000415188 OSBPL9Q96SU4 736 aa16.12■□□□□ 0.17
USP4-203ENST00000415188 TSEN34Q9BSV6 310 aaKnown RBP16.12■□□□□ 0.17
USP4-203ENST00000415188 MAP3K20Q9NYL2 800 aaKnown RBP16.12■□□□□ 0.17
USP4-203ENST00000415188 CYP39A1Q9NYL5 469 aa16.12■□□□□ 0.17
USP4-203ENST00000415188 SRGAP2O75044 1071 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 GFPT2O94808 682 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 GUCY2CP25092 1073 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 ITGB8P26012 769 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 PAFAH1B1P43034 410 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 ALCAMQ13740 583 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 CASP8Q14790 479 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 MCF2L2Q86YR7 1114 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 CREG2Q8IUH2 290 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 TPH2Q8IWU9 490 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 MXRA8Q9BRK3 442 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 ZNF577Q9BSK1 485 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 CRACR2AQ9BSW2 395 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 STARD7Q9NQZ5 370 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 ST7Q9NRC1 585 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 RGL1Q9NZL6 768 aa16.11■□□□□ 0.17
USP4-203ENST00000415188 MOXD2PA6NHM9 499 aa16.1■□□□□ 0.17
USP4-203ENST00000415188 ASB14A6NK59 587 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms