RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 ATXN2LQ8WWM7 1075 aaKnown RBP5.57□□□□□ -1.52
PTPRK-210ENST00000415055 SOCS4Q8WXH5 440 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 ASB2Q96Q27 587 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 CEP89Q96ST8 783 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 PAGR1Q9BTK6 254 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 MRIQ9BWK5 157 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 C1QTNF1Q9BXJ1 281 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 ASCC2Q9H1I8 757 aaPredicted RBP5.57□□□□□ -1.52
PTPRK-210ENST00000415055 TRIT1Q9H3H1 467 aaKnown RBP5.57□□□□□ -1.52
PTPRK-210ENST00000415055 KCNK12Q9HB15 430 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 C9orf78Q9NZ63 289 aaPredicted RBP5.57□□□□□ -1.52
PTPRK-210ENST00000415055 PFDN2Q9UHV9 154 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 REV3LO60673 3130 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 SPTBN4Q9H254 2564 aa5.57□□□□□ -1.52
PTPRK-210ENST00000415055 MROH5Q6ZUA9 1318 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 ANKRD34BA5PLL1 514 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 B2RBV5 119 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 ALG1L2C9J202 215 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 KBTBD13C9JR72 458 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 PLD2O14939 933 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 CTNND1O60716 968 aaKnown RBP5.56□□□□□ -1.52
PTPRK-210ENST00000415055 PDGFRBP09619 1106 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 IFIT1P09914 478 aaKnown RBP5.56□□□□□ -1.52
PTPRK-210ENST00000415055 GLDCP23378 1020 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 TPP2P29144 1249 aaPredicted RBP5.56□□□□□ -1.52
PTPRK-210ENST00000415055 GBP1P32455 592 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 SOX5P35711 763 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 SLC10A6Q3KNW5 377 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 PLEKHG6Q3KR16 790 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 GJC2Q5T442 439 aaPredicted RBP5.56□□□□□ -1.52
PTPRK-210ENST00000415055 MFSD14CQ5VZR4 134 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 MRM1Q6IN84 353 aaKnown RBP5.56□□□□□ -1.52
PTPRK-210ENST00000415055 KIAA1211LQ6NV74 962 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 GPRC5AQ8NFJ5 357 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 WDR66Q8TBY9 1149 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 CHAC2Q8WUX2 184 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 TSR2Q969E8 191 aaKnown RBP5.56□□□□□ -1.52
PTPRK-210ENST00000415055 Q96M66 194 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 DUSP15Q9H1R2 295 aaPredicted RBP5.56□□□□□ -1.52
PTPRK-210ENST00000415055 ADAMTS10Q9H324 1103 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 CAAP1Q9H8G2 361 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.56□□□□□ -1.52
PTPRK-210ENST00000415055 INTS7Q9NVH2 962 aaKnown RBP5.56□□□□□ -1.52
PTPRK-210ENST00000415055 GEMIN8Q9NWZ8 242 aaKnown RBP5.56□□□□□ -1.52
PTPRK-210ENST00000415055 SUGT1Q9Y2Z0 365 aa5.56□□□□□ -1.52
PTPRK-210ENST00000415055 CHD9Q3L8U1 2897 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 WASH4PA8MWX3 477 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 ETV2O00321 342 aaPredicted RBP5.55□□□□□ -1.52
PTPRK-210ENST00000415055 APAF1O14727 1248 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 RGS13O14921 159 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 UBOX5O94941 541 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 S100BP04271 92 aaPredicted RBP5.55□□□□□ -1.52
PTPRK-210ENST00000415055 CPEP16870 476 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 PRDX5P30044 214 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 MAPK4P31152 587 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 PMS1P54277 932 aaKnown RBP5.55□□□□□ -1.52
PTPRK-210ENST00000415055 HSP90AA2PQ14568 343 aaPredicted RBP5.55□□□□□ -1.52
PTPRK-210ENST00000415055 TWISTNBQ3B726 338 aaPredicted RBP5.55□□□□□ -1.52
PTPRK-210ENST00000415055 TKFCQ3LXA3 575 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 GNPTABQ3T906 1256 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 TRIM60Q495X7 471 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 LRRC24Q50LG9 513 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 ANO1Q5XXA6 986 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 TTLL10Q6ZVT0 673 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 PLEKHH3Q7Z736 793 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 SCUBE1Q8IWY4 988 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 TMEM192Q8IY95 271 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 DNAJB8Q8NHS0 232 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 KCNN1Q92952 543 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 FERMT2Q96AC1 680 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 TIFAQ96CG3 184 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 ZNF512BQ96KM6 892 aaPredicted RBP5.55□□□□□ -1.52
PTPRK-210ENST00000415055 CCDC74BQ96LY2 380 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 SLC6A18Q96N87 628 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 APBA2Q99767 749 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.55□□□□□ -1.52
PTPRK-210ENST00000415055 PRDM12Q9H4Q4 367 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 TMOD4Q9NZQ9 345 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 CHD7Q9P2D1 2997 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 DDX20Q9UHI6 824 aaKnown RBP5.55□□□□□ -1.52
PTPRK-210ENST00000415055 CEP131Q9UPN4 1083 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 SMG5Q9UPR3 1016 aaKnown RBP5.55□□□□□ -1.52
PTPRK-210ENST00000415055 MAPRE3Q9UPY8 281 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 PTPRZ1P23471 2315 aaPredicted RBP5.55□□□□□ -1.52
PTPRK-210ENST00000415055 CACNA1GO43497 2377 aa5.55□□□□□ -1.52
PTPRK-210ENST00000415055 TRANK1O15050 2925 aa5.54□□□□□ -1.52
PTPRK-210ENST00000415055 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.54□□□□□ -1.52
PTPRK-210ENST00000415055 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.54□□□□□ -1.52
PTPRK-210ENST00000415055 DDTLA6NHG4 134 aaPredicted RBP5.54□□□□□ -1.52
PTPRK-210ENST00000415055 GRM8O00222 908 aa5.54□□□□□ -1.52
PTPRK-210ENST00000415055 DNM1LO00429 736 aa5.54□□□□□ -1.52
PTPRK-210ENST00000415055 MSCO60682 206 aa5.54□□□□□ -1.52
PTPRK-210ENST00000415055 GLRX3O76003 335 aaKnown RBP5.54□□□□□ -1.52
PTPRK-210ENST00000415055 FAM153BP0C7A2 387 aa5.54□□□□□ -1.52
PTPRK-210ENST00000415055 SRFP11831 508 aa5.54□□□□□ -1.52
PTPRK-210ENST00000415055 SLC5A1P13866 664 aa5.54□□□□□ -1.52
PTPRK-210ENST00000415055 STAT3P40763 770 aa5.54□□□□□ -1.52
PTPRK-210ENST00000415055 HERVK_113P62684 666 aa5.54□□□□□ -1.52
PTPRK-210ENST00000415055 EXOSC10Q01780 885 aaKnown RBP5.54□□□□□ -1.52
PTPRK-210ENST00000415055 RALBP1Q15311 655 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms