RNA–Protein interactions for RNA: ENST00000415046.6

PTPRK-209, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 1,029 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-209ENST00000415046 CDK19Q9BWU1 502 aa6.03□□□□□ -1.44
PTPRK-209ENST00000415046 PCED1AQ9H1Q7 454 aa6.03□□□□□ -1.44
PTPRK-209ENST00000415046 OR10A2Q9H208 303 aa6.03□□□□□ -1.44
PTPRK-209ENST00000415046 PUF60Q9UHX1 559 aaKnown RBP6.03□□□□□ -1.44
PTPRK-209ENST00000415046 PLCH1Q4KWH8 1693 aa6.03□□□□□ -1.44
PTPRK-209ENST00000415046 COL22A1Q8NFW1 1626 aaPredicted RBP6.03□□□□□ -1.44
PTPRK-209ENST00000415046 PXDNQ92626 1479 aa6.02□□□□□ -1.44
PTPRK-209ENST00000415046 NRKQ7Z2Y5 1582 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 TCRBV16S1A1N1A0A5B0 115 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 SLC12A8A0AV02 714 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 NPTXRO95502 500 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 MRE11P49959 708 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 MEOX1P50221 254 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 HMGA2P52926 109 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 FOXE3Q13461 319 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 MOGSQ13724 837 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 GRAMD4Q6IC98 578 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 MAMDC4Q6UXC1 1216 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 FILIP1Q7Z7B0 1213 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 ZFPM1Q8IX07 1006 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 WDR48Q8TAF3 677 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 PMFBP1Q8TBY8 1022 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 THAP3Q8WTV1 239 aaPredicted RBP6.02□□□□□ -1.45
PTPRK-209ENST00000415046 GBP4Q96PP9 640 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 SRPK1Q96SB4 655 aaKnown RBP6.02□□□□□ -1.45
PTPRK-209ENST00000415046 LTN1O94822 1766 aa6.02□□□□□ -1.45
PTPRK-209ENST00000415046 PIK3C2AO00443 1686 aa6.01□□□□□ -1.45
PTPRK-209ENST00000415046 PPIP5K1Q6PFW1 1433 aa6.01□□□□□ -1.45
PTPRK-209ENST00000415046 ST20-MTHFSA0A0A6YYL1 179 aa6.01□□□□□ -1.45
PTPRK-209ENST00000415046 PRAMEF22A3QJZ6 481 aa6.01□□□□□ -1.45
PTPRK-209ENST00000415046 HGFACQ04756 655 aa6.01□□□□□ -1.45
PTPRK-209ENST00000415046 USP39Q53GS9 565 aaKnown RBP6.01□□□□□ -1.45
PTPRK-209ENST00000415046 TMEM177Q53S58 311 aa6.01□□□□□ -1.45
PTPRK-209ENST00000415046 CATSPEREQ5SY80 951 aa6.01□□□□□ -1.45
PTPRK-209ENST00000415046 ABHD17CQ6PCB6 329 aa6.01□□□□□ -1.45
PTPRK-209ENST00000415046 RTKN2Q8IZC4 609 aa6.01□□□□□ -1.45
PTPRK-209ENST00000415046 HIPK4Q8NE63 616 aa6.01□□□□□ -1.45
PTPRK-209ENST00000415046 ZNF503Q96F45 646 aa6.01□□□□□ -1.45
PTPRK-209ENST00000415046 FAM89AQ96GI7 184 aa6.01□□□□□ -1.45
PTPRK-209ENST00000415046 MRIQ9BWK5 157 aa6.01□□□□□ -1.45
PTPRK-209ENST00000415046 KRTAP9-8Q9BYQ0 159 aa6.01□□□□□ -1.45
PTPRK-209ENST00000415046 C12orf65Q9H3J6 166 aaKnown RBP6.01□□□□□ -1.45
PTPRK-209ENST00000415046 TRIM39Q9HCM9 518 aa6.01□□□□□ -1.45
PTPRK-209ENST00000415046 EVC2Q86UK5 1308 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 ANKRD26Q9UPS8 1709 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 GOLGA6L22H0YM25 854 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 SUV39H1O43463 412 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 HIP1RO75146 1068 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 NRN1LQ496H8 165 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 C2orf27AQ580R0 203 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 SOGA3Q5TF21 947 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 OTOP1Q7RTM1 612 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 FGD2Q7Z6J4 655 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 IGSF22Q8N9C0 903 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 NGDNQ8NEJ9 315 aaKnown RBP6□□□□□ -1.45
PTPRK-209ENST00000415046 CALML6Q8TD86 181 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 ZNF341Q9BYN7 854 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 NCOA5Q9HCD5 579 aaKnown RBP6□□□□□ -1.45
PTPRK-209ENST00000415046 HS3ST3A1Q9Y663 406 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 PTCH2Q9Y6C5 1203 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 DISP3Q9P2K9 1392 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 KAT6BQ8WYB5 2073 aa6□□□□□ -1.45
PTPRK-209ENST00000415046 NPHP3Q7Z494 1330 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 LRP6O75581 1613 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 MAP2P11137 1827 aaKnown RBP5.99□□□□□ -1.45
PTPRK-209ENST00000415046 PNPLA6Q8IY17 1366 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 JCADQ9P266 1359 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 SBNO2Q9Y2G9 1366 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 PMS2P1A4D2B8 440 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 HSPA5P11021 654 aaKnown RBP5.99□□□□□ -1.45
PTPRK-209ENST00000415046 APEX1P27695 318 aaKnown RBP5.99□□□□□ -1.45
PTPRK-209ENST00000415046 STAT5BP51692 787 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 IRF9Q00978 393 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 KLF10Q13118 480 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 TMEM132BQ14DG7 1078 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 KRT28Q7Z3Y7 464 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 RTN4RL1Q86UN2 441 aaPredicted RBP5.99□□□□□ -1.45
PTPRK-209ENST00000415046 GPR135Q8IZ08 494 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 BCL6BQ8N143 479 aaPredicted RBP5.99□□□□□ -1.45
PTPRK-209ENST00000415046 EXTL1Q92935 676 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 POLR3GLQ9BT43 218 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 BOCQ9BWV1 1114 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 NELFAQ9H3P2 528 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 TNS3Q68CZ2 1445 aa5.99□□□□□ -1.45
PTPRK-209ENST00000415046 NPIPB8E9PQR5 432 aa5.98□□□□□ -1.45
PTPRK-209ENST00000415046 SLC26A4O43511 780 aa5.98□□□□□ -1.45
PTPRK-209ENST00000415046 ZBTB48P10074 688 aaPredicted RBP5.98□□□□□ -1.45
PTPRK-209ENST00000415046 ACRV1P26436 265 aa5.98□□□□□ -1.45
PTPRK-209ENST00000415046 MECP2P51608 486 aaKnown RBP5.98□□□□□ -1.45
PTPRK-209ENST00000415046 ALDH6A1Q02252 535 aaKnown RBP5.98□□□□□ -1.45
PTPRK-209ENST00000415046 MAP3K12Q12852 859 aa5.98□□□□□ -1.45
PTPRK-209ENST00000415046 FOXL1Q12952 345 aa5.98□□□□□ -1.45
PTPRK-209ENST00000415046 CC2D1AQ6P1N0 951 aaPredicted RBP5.98□□□□□ -1.45
PTPRK-209ENST00000415046 ZNF808Q8N4W9 903 aaPredicted RBP5.98□□□□□ -1.45
PTPRK-209ENST00000415046 C2orf69Q8N8R5 385 aa5.98□□□□□ -1.45
PTPRK-209ENST00000415046 OR14K1Q8NGZ2 314 aa5.98□□□□□ -1.45
PTPRK-209ENST00000415046 FOXRED1Q96CU9 486 aaPredicted RBP5.98□□□□□ -1.45
PTPRK-209ENST00000415046 FOXB1Q99853 325 aa5.98□□□□□ -1.45
PTPRK-209ENST00000415046 PLA2G3Q9NZ20 509 aa5.98□□□□□ -1.45
PTPRK-209ENST00000415046 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms