RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 RUSC1Q9BVN2 902 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 LRRC27Q9C0I9 530 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 KANSL3Q9P2N6 904 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 ODF2LQ9ULJ1 636 aa16.23■□□□□ 0.19
CHD1-202ENST00000414220 CNTNAP2Q9UHC6 1331 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 COL4A6Q14031 1691 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 LOXHD1Q8IVV2 1947 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 H3BNC9 293 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 ACKR2O00590 384 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 N4BP3O15049 544 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 ARHGEF15O94989 841 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 BRD1O95696 1058 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 PRKCBP05771 671 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 FGFR1P11362 822 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 ITGA4P13612 1032 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 LAG3P18627 525 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 HOXA11P31270 313 aaPredicted RBP16.22■□□□□ 0.19
CHD1-202ENST00000414220 ABCD1P33897 745 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 ME1P48163 572 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 KRT85P78386 507 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 NUCB2P80303 420 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 STRN3Q13033 797 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 SLC27A1Q6PCB7 646 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 SV2BQ7L1I2 683 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 GPBP1Q86WP2 473 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 P2RX5Q93086 422 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 LMAN2LQ9H0V9 348 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 FZD8Q9H461 694 aa16.22■□□□□ 0.19
CHD1-202ENST00000414220 MRPL42Q9Y6G3 142 aaKnown RBP16.22■□□□□ 0.19
CHD1-202ENST00000414220 A0A1B0GUA9 196 aa16.21■□□□□ 0.19
CHD1-202ENST00000414220 C5orf67F2Z3F1 127 aa16.21■□□□□ 0.19
CHD1-202ENST00000414220 RFXAPO00287 272 aa16.21■□□□□ 0.19
CHD1-202ENST00000414220 TBCAO75347 108 aaKnown RBP16.21■□□□□ 0.19
CHD1-202ENST00000414220 FAM13AO94988 1023 aa16.21■□□□□ 0.19
CHD1-202ENST00000414220 PLS3P13797 630 aa16.21■□□□□ 0.19
CHD1-202ENST00000414220 ARF4P18085 180 aaPredicted RBP16.21■□□□□ 0.19
CHD1-202ENST00000414220 NCLP19338 710 aaKnown RBP16.21■□□□□ 0.19
CHD1-202ENST00000414220 STAT6P42226 847 aa16.21■□□□□ 0.19
CHD1-202ENST00000414220 NPTX2P47972 431 aa16.21■□□□□ 0.19
CHD1-202ENST00000414220 MRPL10Q7Z7H8 261 aaKnown RBP16.21■□□□□ 0.19
CHD1-202ENST00000414220 ZNF598Q86UK7 904 aaKnown RBP16.21■□□□□ 0.19
CHD1-202ENST00000414220 SPIRE2Q8WWL2 714 aa16.21■□□□□ 0.19
CHD1-202ENST00000414220 BSNDQ8WZ55 320 aa16.21■□□□□ 0.19
CHD1-202ENST00000414220 CPB2Q96IY4 423 aa16.21■□□□□ 0.19
CHD1-202ENST00000414220 CASD1Q96PB1 797 aa16.21■□□□□ 0.19
CHD1-202ENST00000414220 FAM193BQ96PV7 902 aaPredicted RBP16.21■□□□□ 0.19
CHD1-202ENST00000414220 PYM1Q9BRP8 204 aaKnown RBP16.21■□□□□ 0.19
CHD1-202ENST00000414220 TMEM134Q9H6X4 195 aa16.21■□□□□ 0.19
CHD1-202ENST00000414220 TYW1Q9NV66 732 aaKnown RBP16.21■□□□□ 0.19
CHD1-202ENST00000414220 FAM13BQ9NYF5 915 aa16.21■□□□□ 0.19
CHD1-202ENST00000414220 ARID2Q68CP9 1835 aa16.21■□□□□ 0.19
CHD1-202ENST00000414220 GBF1Q92538 1859 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 RBAK-RBAKDNI3L0D1 243 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 GATMP50440 423 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 DNM1Q05193 864 aaKnown RBP16.2■□□□□ 0.18
CHD1-202ENST00000414220 RNASELQ05823 741 aaKnown RBP16.2■□□□□ 0.18
CHD1-202ENST00000414220 RAD51AP2Q09MP3 1159 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 PKP1Q13835 747 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 MCM6Q14566 821 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 MICALL1Q8N3F8 863 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 SLC17A8Q8NDX2 589 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 HELQQ8TDG4 1101 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 GDPD5Q8WTR4 605 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 PPM1EQ8WY54 764 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 NTPCRQ9BSD7 190 aaKnown RBP16.2■□□□□ 0.18
CHD1-202ENST00000414220 ZHX3Q9H4I2 956 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 RSAD1Q9HA92 442 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 PARVGQ9HBI0 331 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 POLD4Q9HCU8 107 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 BLOC1S4Q9NUP1 217 aa16.2■□□□□ 0.18
CHD1-202ENST00000414220 PUF60Q9UHX1 559 aaKnown RBP16.2■□□□□ 0.18
CHD1-202ENST00000414220 SFI1A8K8P3 1242 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 PPM1AP35813 382 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 ALDH7A1P49419 539 aaKnown RBP16.19■□□□□ 0.18
CHD1-202ENST00000414220 AMPD3Q01432 767 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 KRT17Q04695 432 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 ADGRE1Q14246 886 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 BMS1Q14692 1282 aaKnown RBP16.19■□□□□ 0.18
CHD1-202ENST00000414220 AMHR2Q16671 573 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 DCAF4L1Q3SXM0 396 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 NOMO2Q5JPE7 1267 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 THNSL1Q8IYQ7 743 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 MYCT1Q8N699 235 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 IQUBQ8NA54 791 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 LPPQ93052 612 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 PPP2R3CQ969Q6 453 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 MRPL38Q96DV4 380 aaKnown RBP16.19■□□□□ 0.18
CHD1-202ENST00000414220 ZNF558Q96NG5 402 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 MRPL4Q9BYD3 311 aaKnown RBP16.19■□□□□ 0.18
CHD1-202ENST00000414220 SCAND2PQ9GZW5 306 aaPredicted RBP16.19■□□□□ 0.18
CHD1-202ENST00000414220 CUEDC2Q9H467 287 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 INPP5FQ9Y2H2 1132 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 IPPQ9Y573 584 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 MTCH2Q9Y6C9 303 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 PTPRSQ13332 1948 aa16.19■□□□□ 0.18
CHD1-202ENST00000414220 LAMA2P24043 3122 aaKnown RBP16.18■□□□□ 0.18
CHD1-202ENST00000414220 EPOPA6NHQ4 379 aa16.18■□□□□ 0.18
CHD1-202ENST00000414220 SLC16A4O15374 487 aa16.18■□□□□ 0.18
CHD1-202ENST00000414220 B4GALT5O43286 388 aa16.18■□□□□ 0.18
CHD1-202ENST00000414220 NR1I2O75469 434 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms