RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 C2orf54Q08AI8 447 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 NBPF20Q3BBV1 942 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 CCDC92Q53HC0 331 aaPredicted RBP11.3□□□□□ -0.6
SCN5A-204ENST00000414099 LCORLQ8N3X6 602 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 TNIP3Q96KP6 325 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 SEC31BQ9NQW1 1179 aa11.3□□□□□ -0.6
SCN5A-204ENST00000414099 WARS2Q9UGM6 360 aaKnown RBP11.3□□□□□ -0.6
SCN5A-204ENST00000414099 LSM7Q9UK45 103 aaKnown RBP11.3□□□□□ -0.6
SCN5A-204ENST00000414099 CCDC159P0C7I6 412 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 SERPINB4P48594 390 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 TKFCQ3LXA3 575 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 UNC13DQ70J99 1090 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 RRM2BQ7LG56 351 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 TNIP2Q8NFZ5 429 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 LPAR1Q92633 364 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 ASIC4Q96FT7 647 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 ZFP69BQ9UJL9 534 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 KDM1AO60341 852 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 APOA4P06727 396 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 IL10P22301 178 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 DYNLT1P63172 113 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 SNX17Q15036 470 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 PARK7Q99497 189 aaKnown RBP11.29□□□□□ -0.6
SCN5A-204ENST00000414099 TJP2Q9UDY2 1190 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 CCDC22O60826 627 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 PRKCQQ04759 706 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 EPM2AIP1Q7L775 607 aaPredicted RBP11.29□□□□□ -0.6
SCN5A-204ENST00000414099 GOLPH3LQ9H4A5 285 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 INPP5FQ9Y2H2 1132 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 CACNA1FO60840 1977 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 RASSF10A6NK89 507 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 STAT3P40763 770 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 QARSP47897 775 aaKnown RBP11.29□□□□□ -0.6
SCN5A-204ENST00000414099 FAM83BQ5T0W9 1011 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 SP8Q8IXZ3 490 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 ZSWIM5Q9P217 1185 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 AFF2P51816 1311 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 SPATA31A3Q5VYP0 1347 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 FAM129AQ9BZQ8 928 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 MROH7-TTC4A0A0A0MT08 1334 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 UBE4BO95155 1302 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 NSUN2Q08J23 767 aaKnown RBP eCLIP11.29□□□□□ -0.6
SCN5A-204ENST00000414099 SNAPC2Q13487 334 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 GTF2H3Q13889 308 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 SDE2Q6IQ49 451 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 SZRD1Q7Z422 152 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 MB21D1Q8N884 522 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 ZNF579Q8NAF0 562 aaKnown RBP11.29□□□□□ -0.6
SCN5A-204ENST00000414099 ZNF555Q8NEP9 628 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 USP6NLQ92738 828 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 ZFYVE28Q9HCC9 887 aa11.29□□□□□ -0.6
SCN5A-204ENST00000414099 ZNF335Q9H4Z2 1342 aaPredicted RBP11.28□□□□□ -0.6
SCN5A-204ENST00000414099 DEAF1O75398 565 aaPredicted RBP11.28□□□□□ -0.6
SCN5A-204ENST00000414099 RPLP2P05387 115 aaKnown RBP11.28□□□□□ -0.6
SCN5A-204ENST00000414099 MXD4Q14582 209 aaPredicted RBP11.28□□□□□ -0.6
SCN5A-204ENST00000414099 STKLD1Q8NE28 680 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 NGRNQ9NPE2 291 aaKnown RBP11.28□□□□□ -0.6
SCN5A-204ENST00000414099 PCDHGB4Q9UN71 923 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 C19orf81C9J6K1 198 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 EFHC2Q5JST6 749 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 SCARA5Q6ZMJ2 495 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 FAM133AQ8N9E0 248 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 AAASQ9NRG9 546 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 GINM1Q9NU53 330 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 ADGRB3O60242 1522 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 CDHR2Q9BYE9 1310 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 ZNF197O14709 1029 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 TBC1D10BQ4KMP7 808 aaPredicted RBP11.28□□□□□ -0.6
SCN5A-204ENST00000414099 ZC3H18Q86VM9 953 aaKnown RBP11.28□□□□□ -0.6
SCN5A-204ENST00000414099 CRB1P82279 1406 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 HOXA13P31271 388 aaPredicted RBP11.28□□□□□ -0.6
SCN5A-204ENST00000414099 MMP14P50281 582 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 ST8SIA6P61647 398 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 RBBP7Q16576 425 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 DUOXA2Q1HG44 320 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 RASSF3Q86WH2 238 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 KIF20BQ96Q89 1820 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 CSPG5O95196 566 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 IER5Q5VY09 327 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 SLC38A7Q9NVC3 462 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 BNIP3LO60238 219 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 DMTNQ08495 405 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 INPP5AQ14642 412 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 RHPN2Q8IUC4 686 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 CDKL3Q8IVW4 592 aaPredicted RBP11.28□□□□□ -0.6
SCN5A-204ENST00000414099 ADAM22Q9P0K1 906 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 MAN1B1Q9UKM7 699 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 LRRIQ3A6PVS8 624 aaPredicted RBP11.28□□□□□ -0.6
SCN5A-204ENST00000414099 MMEP08473 750 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 USP11P51784 963 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 PBXIP1Q96AQ6 731 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 TADA1Q96BN2 335 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 ALKBH8Q96BT7 664 aaKnown RBP11.28□□□□□ -0.6
SCN5A-204ENST00000414099 GTSE1Q9NYZ3 720 aa11.28□□□□□ -0.6
SCN5A-204ENST00000414099 PFASO15067 1338 aa11.27□□□□□ -0.6
SCN5A-204ENST00000414099 TAB3Q8N5C8 712 aaPredicted RBP11.27□□□□□ -0.6
SCN5A-204ENST00000414099 PUS3Q9BZE2 481 aaKnown RBP11.27□□□□□ -0.6
SCN5A-204ENST00000414099 IP6K2Q9UHH9 426 aa11.27□□□□□ -0.6
SCN5A-204ENST00000414099 ARHGEF40Q8TER5 1519 aa11.27□□□□□ -0.6
SCN5A-204ENST00000414099 CPSF1Q10570 1443 aaKnown RBP11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms