RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 FAM187BQ17R55 369 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 NOTUMQ6P988 496 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 MRPL10Q7Z7H8 261 aaKnown RBP11.13□□□□□ -0.63
TMEM248-202ENST00000413593 LRRC43Q8N309 656 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 HELQQ8TDG4 1101 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 RAD54LQ92698 747 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 CPB2Q96IY4 423 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 DRC1Q96MC2 740 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 KIFC3Q9BVG8 833 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 PLVAPQ9BX97 442 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 EIF2AQ9BY44 585 aaKnown RBP11.13□□□□□ -0.63
TMEM248-202ENST00000413593 CCDC113Q9H0I3 377 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 CWH43Q9H720 699 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 KCND2Q9NZV8 630 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 CDH23Q9H251 3354 aa11.13□□□□□ -0.63
TMEM248-202ENST00000413593 CNTNAP2Q9UHC6 1331 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 LOXHD1Q8IVV2 1947 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 A0A1B0GUA9 196 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 TTLL13PA6NNM8 815 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 SFI1A8K8P3 1242 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 PPP6R2O75170 966 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 BRD1O95696 1058 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 PRKCBP05771 671 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 NCLP19338 710 aaKnown RBP11.12□□□□□ -0.63
TMEM248-202ENST00000413593 NPTX2P47972 431 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 EFNA5P52803 228 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 PEX3P56589 373 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 RAD51AP2Q09MP3 1159 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 BECN1Q14457 450 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 CCDC85BQ15834 202 aaPredicted RBP11.12□□□□□ -0.63
TMEM248-202ENST00000413593 MAPK6Q16659 721 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 FOXD4L6Q3SYB3 417 aaPredicted RBP11.12□□□□□ -0.63
TMEM248-202ENST00000413593 LONRF3Q496Y0 759 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 NAALADL2Q58DX5 795 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 ARSHQ5FYA8 562 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 GLB1LQ6UWU2 654 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 FOXD4L3Q6VB84 417 aaPredicted RBP11.12□□□□□ -0.63
TMEM248-202ENST00000413593 AGMOQ6ZNB7 445 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 LRRC55Q6ZSA7 311 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 GPBP1Q86WP2 473 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 CDR2LQ86X02 465 aaPredicted RBP11.12□□□□□ -0.63
TMEM248-202ENST00000413593 MICALL1Q8N3F8 863 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 SMG8Q8ND04 991 aaKnown RBP11.12□□□□□ -0.63
TMEM248-202ENST00000413593 CNNM3Q8NE01 707 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 PPM1EQ8WY54 764 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 RSPH1Q8WYR4 309 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 P2RX5Q93086 422 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 PGBD4Q96DM1 585 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 C17orf75Q9HAS0 396 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 AAASQ9NRG9 546 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 ARHGAP28Q9P2N2 729 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 CCDC39Q9UFE4 941 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 ZDHHC9Q9Y397 364 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 IPPQ9Y573 584 aa11.12□□□□□ -0.63
TMEM248-202ENST00000413593 NPHP3-ACAD11A0A0J9YXS1 232 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 CCDC169A6NNP5 214 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 ACKR2O00590 384 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 GRM6O15303 877 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 OFD1O75665 1012 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 EDN1P05305 212 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 ITGB1P05556 798 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 PLS3P13797 630 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 LAG3P18627 525 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 LIG1P18858 919 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 DDIT3P35638 169 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 TXLNAP40222 546 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 DMP1Q13316 513 aaPredicted RBP11.11□□□□□ -0.63
TMEM248-202ENST00000413593 PRPF4BQ13523 1007 aaKnown RBP11.11□□□□□ -0.63
TMEM248-202ENST00000413593 DHX8Q14562 1220 aaKnown RBP11.11□□□□□ -0.63
TMEM248-202ENST00000413593 MCM6Q14566 821 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 PTPROQ16827 1216 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 SPOUT1Q5T280 376 aaKnown RBP11.11□□□□□ -0.63
TMEM248-202ENST00000413593 ATL3Q6DD88 541 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 SLC27A1Q6PCB7 646 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 KLHL23Q8NBE8 558 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 COLGALT1Q8NBJ5 622 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 SPIRE2Q8WWL2 714 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 LARP4BQ92615 738 aaKnown RBP11.11□□□□□ -0.63
TMEM248-202ENST00000413593 MRPL38Q96DV4 380 aaKnown RBP11.11□□□□□ -0.63
TMEM248-202ENST00000413593 MRPL9Q9BYD2 267 aaKnown RBP11.11□□□□□ -0.63
TMEM248-202ENST00000413593 LMAN2LQ9H0V9 348 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 RSAD1Q9HA92 442 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 STK17AQ9UEE5 414 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 DAXXQ9UER7 740 aaPredicted RBP11.11□□□□□ -0.63
TMEM248-202ENST00000413593 PLAGL2Q9UPG8 496 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 USP20Q9Y2K6 914 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 PCDHB12Q9Y5F1 795 aa11.11□□□□□ -0.63
TMEM248-202ENST00000413593 PHLPP2Q6ZVD8 1323 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 A0A087X0B3 334 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 K7ERI5 159 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 NPTXRO95502 500 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 ITGA4P13612 1032 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 DNM1Q05193 864 aaKnown RBP11.1□□□□□ -0.63
TMEM248-202ENST00000413593 CSPP1Q1MSJ5 1256 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 NOMO2Q5JPE7 1267 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 AXDND1Q5T1B0 1012 aaPredicted RBP11.1□□□□□ -0.63
TMEM248-202ENST00000413593 RRAGBQ5VZM2 374 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 KCNT2Q6UVM3 1135 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 TAS1R3Q7RTX0 852 aa11.1□□□□□ -0.63
TMEM248-202ENST00000413593 SPPL3Q8TCT6 385 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms