RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 PAPLNO95428 1278 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 URODP06132 367 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 DCNP07585 359 aaKnown RBP10.75□□□□□ -0.69
RFFL-203ENST00000413582 CDC27P30260 824 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 AFF1P51825 1210 aaKnown RBP10.75□□□□□ -0.69
RFFL-203ENST00000413582 JAK3P52333 1124 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 SPECC1Q5M775 1068 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 PHLDB3Q6NSJ2 640 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 CYP26C1Q6V0L0 522 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 AGMOQ6ZNB7 445 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 ZNF410Q86VK4 478 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 RNF168Q8IYW5 571 aaPredicted RBP10.75□□□□□ -0.69
RFFL-203ENST00000413582 DCLK2Q8N568 766 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 URGCPQ8TCY9 931 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 GPR152Q8TDT2 470 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 NXPE3Q969Y0 559 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 ZNF707Q96C28 371 aaPredicted RBP10.75□□□□□ -0.69
RFFL-203ENST00000413582 RPS6KC1Q96S38 1066 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 TMEM175Q9BSA9 504 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 HERC2P3Q9BVR0 1158 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 MARCH5Q9NX47 278 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 SEPT9Q9UHD8 586 aaPredicted RBP10.75□□□□□ -0.69
RFFL-203ENST00000413582 CHD8Q9HCK8 2581 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 COL4A3Q01955 1670 aa10.75□□□□□ -0.69
RFFL-203ENST00000413582 TDRD15B5MCY1 1934 aaKnown RBP10.74□□□□□ -0.69
RFFL-203ENST00000413582 CCDC195A0A1B0GUA6 201 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 POTEMA6NI47 508 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 C2CD2LO14523 706 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 RFPL2O75678 378 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 STBD1O95210 358 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 EFEMP2O95967 443 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 GLUD1P00367 558 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 SOD2P04179 222 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 ADH1AP07327 375 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 GLULP15104 373 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 SFNP31947 248 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 RCAN1P53805 252 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 CDC42EP1Q00587 391 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 EXOSC10Q01780 885 aaKnown RBP10.74□□□□□ -0.69
RFFL-203ENST00000413582 HTR4Q13639 388 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 MTERF2Q49AM1 385 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 POTEGQ6S5H5 508 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 CATSPER4Q7RTX7 472 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 C1orf210Q8IVY1 113 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 MAML2Q8IZL2 1156 aaPredicted RBP10.74□□□□□ -0.69
RFFL-203ENST00000413582 SUMF1Q8NBK3 374 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 PJA1Q8NG27 643 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 SMG7Q92540 1137 aaKnown RBP10.74□□□□□ -0.69
RFFL-203ENST00000413582 PGBD4Q96DM1 585 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 RIT2Q99578 217 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 ESYT1Q9BSJ8 1104 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 NIFKQ9BYG3 293 aaKnown RBP10.74□□□□□ -0.69
RFFL-203ENST00000413582 INO80BQ9C086 356 aaPredicted RBP10.74□□□□□ -0.69
RFFL-203ENST00000413582 UNC45AQ9H3U1 944 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 RSAD1Q9HA92 442 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 AGPAT5Q9NUQ2 364 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 SIT1Q9Y3P8 196 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 PCDHB2Q9Y5E7 798 aa10.74□□□□□ -0.69
RFFL-203ENST00000413582 KLF18A0A0U1RQI7 1052 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 ANHXE9PGG2 379 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 NRP1O14786 923 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 GAS7O60861 476 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 KRT37O76014 449 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 MYBP10242 640 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 GLUD2P49448 558 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 AK2P54819 239 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 XKR3Q5GH77 459 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 LRCH2Q5VUJ6 765 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 MRPL10Q7Z7H8 261 aaKnown RBP10.73□□□□□ -0.69
RFFL-203ENST00000413582 RHPN2Q8IUC4 686 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 KSR1Q8IVT5 923 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 CCDC12Q8WUD4 166 aaPredicted RBP10.73□□□□□ -0.69
RFFL-203ENST00000413582 SLC5A5Q92911 643 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 GJA10Q969M2 543 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 NLRP4Q96MN2 994 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 CNTNAP3BQ96NU0 1288 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 SH2D3AQ9BRG2 576 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 TEKT3Q9BXF9 490 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 CNTNAP3Q9BZ76 1288 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 FOXQ1Q9C009 403 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 IFT122Q9HBG6 1241 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 RXFP1Q9HBX9 757 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 C6orf50Q9HD87 102 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 SLC2A4RGQ9NR83 387 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 SUCLA2Q9P2R7 463 aaPredicted RBP10.73□□□□□ -0.69
RFFL-203ENST00000413582 FAN1Q9Y2M0 1017 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 PRG3Q9Y2Y8 225 aaPredicted RBP10.73□□□□□ -0.69
RFFL-203ENST00000413582 CNTNAP2Q9UHC6 1331 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 CACNA1GO43497 2377 aa10.73□□□□□ -0.69
RFFL-203ENST00000413582 LRRN2O75325 713 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 PSMD10O75832 226 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 POMCP01189 267 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 LAMP2P13473 410 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 ADD1P35611 737 aaKnown RBP10.72□□□□□ -0.69
RFFL-203ENST00000413582 DNM2P50570 870 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 RSPO4Q2I0M5 234 aaPredicted RBP10.72□□□□□ -0.69
RFFL-203ENST00000413582 UBXN11Q5T124 520 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 ELMSAN1Q6PJG2 1045 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 DCLRE1AQ6PJP8 1040 aa10.72□□□□□ -0.69
RFFL-203ENST00000413582 B3GNT9Q6UX72 402 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms