RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 FAM105AQ9NUU6 356 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 TBC1D13Q9NVG8 400 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 DNAJB4Q9UDY4 337 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 RALYQ9UKM9 306 aaKnown RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 CDH7Q9ULB5 785 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 INPP5FQ9Y2H2 1132 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 PRG3Q9Y2Y8 225 aaPredicted RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 MTF2Q9Y483 593 aaPredicted RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 PCDHB15Q9Y5E8 787 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 U3KPZ7 1027 aaPredicted RBP2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 MYH7P12883 1935 aa2.68□□□□□ -1.98
RNU4-53P-201ENST00000410828 MYO18BQ8IUG5 2567 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 GON4LQ3T8J9 2241 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 A0A087WZ62 844 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 SOBPA7XYQ1 873 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 MEIS3P2A8K0S8 358 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 IPO5O00410 1097 aaKnown RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 MAN2B1O00754 1011 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 NRP1O14786 923 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 DHX15O43143 795 aaKnown RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 TGM5O43548 720 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 GDF9O60383 454 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 XYLBO75191 536 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 NR1I2O75469 434 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 CSDE1O75534 798 aaKnown RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 DDHD2O94830 711 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 PAPLNO95428 1278 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 POMCP01189 267 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 OATP04181 439 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 CYP21A2P08686 494 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 HNRNPA1P09651 372 aaKnown RBP eCLIP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 SPATA31D3P0C874 917 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 CALM1P0DP23 149 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 CALM2P0DP24 149 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 CALM3P0DP25 149 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 HOXB3P14651 431 aaPredicted RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 ATP4AP20648 1035 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 CD72P21854 359 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 FGFR4P22455 802 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 FSHRP23945 695 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 TARSP26639 723 aaKnown RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 CNR2P34972 360 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 SREBF1P36956 1147 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 OR1G1P47890 313 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 CXCL12P48061 93 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 DNM2P50570 870 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 GPC3P51654 580 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 CCR3P51677 355 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 LIMK1P53667 647 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 SETQ01105 290 aaPredicted RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 DSG1Q02413 1049 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 CREMQ03060 361 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 MTAPQ13126 283 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 AP3B2Q13367 1082 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 SIM2Q14190 667 aaPredicted RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 LPAL2Q16609 132 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 AASDHQ4L235 1098 aaPredicted RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF746Q6NUN9 644 aaPredicted RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 PARM1Q6UWI2 310 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 NFXL1Q6ZNB6 911 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 SPATA31D4Q6ZUB0 917 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 TPRG1Q6ZUI0 275 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 NIPA1Q7RTP0 329 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 CATSPER4Q7RTX7 472 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 HEATR3Q7Z4Q2 680 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 GRASPQ7Z6J2 395 aaPredicted RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF410Q86VK4 478 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 PLA2G4DQ86XP0 818 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 PALB2Q86YC2 1186 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 SMAP1Q8IYB5 467 aaPredicted RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF654Q8IZM8 581 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 SRBD1Q8N5C6 995 aaKnown RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 LINC01465Q8N7H1 131 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 ST13P5Q8NFI4 369 aaPredicted RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 IGDCC4Q8TDY8 1250 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 FGF13Q92913 245 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 COL26A1Q96A83 441 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 PGBD1Q96JS3 809 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 FDXACB1Q9BRP7 624 aaPredicted RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF577Q9BSK1 485 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 IER2Q9BTL4 223 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 PHF20Q9BVI0 1012 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 HERC2P3Q9BVR0 1158 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 COLEC11Q9BWP8 271 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 GLT8D2Q9H1C3 349 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 CHRDQ9H2X0 955 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 RSAD1Q9HA92 442 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 SENP2Q9HC62 589 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 UBN1Q9NPG3 1134 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 FAM217BQ9NTX9 383 aaPredicted RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 FNIP2Q9P278 1114 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 GABBR1Q9UBS5 961 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 KCNH3Q9ULD8 1083 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZMIZ1Q9ULJ6 1067 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 POLIQ9UNA4 740 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 PIN4Q9Y237 131 aaKnown RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 SAMM50Q9Y512 469 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 PCDHB2Q9Y5E7 798 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms