RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 RARBP10826 455 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 SKILP12757 684 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 TRIM21P19474 475 aaKnown RBP13.61□□□□□ -0.23
CHMP3-204ENST00000409727 MATR3P43243 847 aaKnown RBP eCLIP13.61□□□□□ -0.23
CHMP3-204ENST00000409727 PSEN2P49810 448 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 SLC9A9Q8IVB4 645 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 TC2NQ8N9U0 490 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 TARS2Q9BW92 718 aaKnown RBP13.61□□□□□ -0.23
CHMP3-204ENST00000409727 FAM49AQ9H0Q0 323 aaPredicted RBP13.61□□□□□ -0.23
CHMP3-204ENST00000409727 FAM207AQ9NSI2 230 aaPredicted RBP13.61□□□□□ -0.23
CHMP3-204ENST00000409727 CGNQ9P2M7 1197 aaKnown RBP13.61□□□□□ -0.23
CHMP3-204ENST00000409727 ANKFY1Q9P2R3 1169 aa13.61□□□□□ -0.23
CHMP3-204ENST00000409727 PHLPP2Q6ZVD8 1323 aa13.6□□□□□ -0.23
CHMP3-204ENST00000409727 FKTNO75072 461 aa13.6□□□□□ -0.23
CHMP3-204ENST00000409727 TMOD1P28289 359 aa13.6□□□□□ -0.23
CHMP3-204ENST00000409727 CCZ1BP86790 482 aa13.6□□□□□ -0.23
CHMP3-204ENST00000409727 CCZ1P86791 482 aaPredicted RBP13.6□□□□□ -0.23
CHMP3-204ENST00000409727 TFDP1Q14186 410 aa13.6□□□□□ -0.23
CHMP3-204ENST00000409727 NFRKBQ6P4R8 1299 aa13.6□□□□□ -0.23
CHMP3-204ENST00000409727 ZBTB8OSQ8IWT0 167 aa13.6□□□□□ -0.23
CHMP3-204ENST00000409727 SLC35C1Q96A29 364 aa13.6□□□□□ -0.23
CHMP3-204ENST00000409727 BORCS6Q96GS4 357 aa13.6□□□□□ -0.23
CHMP3-204ENST00000409727 ERO1AQ96HE7 468 aa13.6□□□□□ -0.23
CHMP3-204ENST00000409727 ZBTB45Q96K62 511 aaPredicted RBP13.6□□□□□ -0.23
CHMP3-204ENST00000409727 SCLT1Q96NL6 688 aa13.6□□□□□ -0.23
CHMP3-204ENST00000409727 ERGIC2Q96RQ1 377 aa13.6□□□□□ -0.23
CHMP3-204ENST00000409727 MKNK1Q9BUB5 465 aa13.6□□□□□ -0.23
CHMP3-204ENST00000409727 EVPLQ92817 2033 aa13.6□□□□□ -0.23
CHMP3-204ENST00000409727 TTC26A0AVF1 554 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 TTLL13PA6NNM8 815 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 INO80B-WBP1J3KQ70 363 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 MFAP3LO75121 409 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 CSDE1O75534 798 aaKnown RBP13.59□□□□□ -0.23
CHMP3-204ENST00000409727 AFPP02771 609 aaKnown RBP13.59□□□□□ -0.23
CHMP3-204ENST00000409727 HMGCRP04035 888 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 HARSP12081 509 aaKnown RBP13.59□□□□□ -0.23
CHMP3-204ENST00000409727 KRT13P13646 458 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 ABCD1P33897 745 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 SNRPFP62306 86 aaKnown RBP13.59□□□□□ -0.23
CHMP3-204ENST00000409727 PURAQ00577 322 aaKnown RBP13.59□□□□□ -0.23
CHMP3-204ENST00000409727 APBA1Q02410 837 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 TMEM62Q0P6H9 643 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 CXCL17Q6UXB2 119 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 CBWD2Q8IUF1 395 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 C12orf56Q8IXR9 622 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 INO80BQ9C086 356 aaPredicted RBP13.59□□□□□ -0.23
CHMP3-204ENST00000409727 TMEM134Q9H6X4 195 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 SPC25Q9HBM1 224 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 XPNPEP3Q9NQH7 507 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 GINS2Q9Y248 185 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 CASP8AP2Q9UKL3 1982 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 A0A087WZ62 844 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 EPHB6O15197 1021 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 PRKCBP05771 671 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 ADRB2P07550 413 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 EFNA5P52803 228 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 GJA9P57773 515 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 DLG4P78352 724 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 ZNF200P98182 395 aaPredicted RBP13.59□□□□□ -0.23
CHMP3-204ENST00000409727 KCNMA1Q12791 1236 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 BFSP1Q12934 665 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 MYBPC2Q14324 1141 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 HIC1Q14526 733 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 SNRNP35Q16560 246 aaKnown RBP13.59□□□□□ -0.23
CHMP3-204ENST00000409727 MAPK6Q16659 721 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 TMEM132AQ24JP5 1023 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 CDCA2Q69YH5 1023 aaPredicted RBP13.59□□□□□ -0.23
CHMP3-204ENST00000409727 NLRP7Q8WX94 980 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 MAP7D2Q96T17 732 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 FDXACB1Q9BRP7 624 aaPredicted RBP13.59□□□□□ -0.23
CHMP3-204ENST00000409727 FAM213AQ9BRX8 229 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 LSM14BQ9BX40 385 aaKnown RBP13.59□□□□□ -0.23
CHMP3-204ENST00000409727 MINDY3Q9H8M7 445 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 SIK3Q9Y2K2 1263 aa13.59□□□□□ -0.23
CHMP3-204ENST00000409727 NRCAMQ92823 1304 aa13.58□□□□□ -0.23
CHMP3-204ENST00000409727 RRN3P2A6NIE6 340 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 RBAK-RBAKDNI3L0D1 243 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 ASAP2O43150 1006 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 KRT9P35527 623 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 TRIM14Q14142 442 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 ZBTB33Q86T24 672 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 GPIHBP1Q8IV16 184 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 CNGA4Q8IV77 575 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 LINC01465Q8N7H1 131 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 C7orf31Q8N865 590 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 CCDC127Q96BQ5 260 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 TCHPQ9BT92 498 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 KATNAL1Q9BW62 490 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 HAPLN2Q9GZV7 340 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 CCDC113Q9H0I3 377 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 C2orf40Q9H1Z8 148 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 AGPAT5Q9NUQ2 364 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 HDAC6Q9UBN7 1215 aa13.58□□□□□ -0.24
CHMP3-204ENST00000409727 THSD7BQ9C0I4 1608 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 HAS3O00219 553 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 B4GALT5O43286 388 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 MSCO60682 206 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 CYP2C9P11712 490 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 PHKA2P46019 1235 aa13.57□□□□□ -0.24
CHMP3-204ENST00000409727 ACOT2P49753 483 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms