RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ALG13Q9NP73 1137 aaKnown RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 MAP3K1Q13233 1512 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 GOLGA8QA0A0J9YX86 632 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 GOLGA8OA6NCC3 632 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 GOLGA8NF8WBI6 632 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 SEC24DO94855 1032 aaPredicted RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 SEC31AO94979 1220 aaKnown RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 MZF1P28698 734 aaPredicted RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 GRAMD1BQ3KR37 738 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 ITPRIPL1Q6GPH6 555 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 PADI6Q6TGC4 694 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 LRRC71Q8N4P6 559 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 RBAKQ9NYW8 714 aaPredicted RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 ZC3H11AO75152 810 aaKnown RBP eCLIP8.93□□□□□ -0.982e-6■■■■□ 24.6
SCN9A-203ENST00000409672 KPNA2P52292 529 aaKnown RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 SNAPC2Q13487 334 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 BBOF1Q8ND07 529 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 GIPC2Q8TF65 315 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 TRIM11Q96F44 468 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 STK17AQ9UEE5 414 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 TBL3Q12788 808 aaKnown RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 SPATA1Q5VX52 437 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 ARL8AQ96BM9 186 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 C11orf70Q9BRQ4 267 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 TRIM54Q9BYV2 358 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 MINPP1Q9UNW1 487 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 A0A1B0GUA9 196 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 IMPDH2P12268 514 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 COPS2P61201 443 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 DHX9Q08211 1270 aaKnown RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 SLC44A2Q8IWA5 706 aaPredicted RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 ANKRD49Q8WVL7 239 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 JADE3Q92613 823 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 CELF1Q92879 486 aaKnown RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 CENPKQ9BS16 269 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 RERGLQ9H628 205 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 PRR12Q9ULL5 1215 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 ALDH1A2O94788 518 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 EIF4A3P38919 411 aaKnown RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 VPS39Q96JC1 886 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 OSGEPL1Q9H4B0 414 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 CYP4F11Q9HBI6 524 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 V9GYQ6 96 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 CROCCP2Q86T23 111 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 GJD4Q96KN9 370 aaPredicted RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 TTI1O43156 1089 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 GLRA4Q5JXX5 417 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 CDR2LQ86X02 465 aaPredicted RBP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 CLEC10AQ8IUN9 316 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 BCAS4Q8TDM0 211 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.93□□□□□ -0.983e-9■■□□□ 14.2
SCN9A-203ENST00000409672 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.93□□□□□ -0.98
SCN9A-203ENST00000409672 OGFRQ9NZT2 677 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 PKP3Q9Y446 797 aa8.93□□□□□ -0.98
SCN9A-203ENST00000409672 H0Y626 953 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 CCT5P48643 541 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 PHKG1Q16816 387 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 DEFB132Q7Z7B7 95 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 RGL4Q8IZJ4 473 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 HSPBP1Q9NZL4 362 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 VGLL3A8MV65 326 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 MYO1DO94832 1006 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 GUCA1CO95843 209 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 TXNRD1Q16881 649 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 LLGL2Q6P1M3 1020 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 CD209Q9NNX6 404 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 GEMIN8Q9NWZ8 242 aaKnown RBP8.92□□□□□ -0.98
SCN9A-203ENST00000409672 PCDHA13Q9Y5I0 950 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 GCC2Q8IWJ2 1684 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 E9PMD0 336 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 GFAPP14136 432 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 DARSP14868 501 aaKnown RBP8.92□□□□□ -0.98
SCN9A-203ENST00000409672 VCAM1P19320 739 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 CA4P22748 312 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 ALDH6A1Q02252 535 aaKnown RBP8.92□□□□□ -0.98
SCN9A-203ENST00000409672 NOL9Q5SY16 702 aaKnown RBP8.92□□□□□ -0.98
SCN9A-203ENST00000409672 HEATR6Q6AI08 1181 aaKnown RBP8.92□□□□□ -0.98
SCN9A-203ENST00000409672 APOA5Q6Q788 366 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 CHSY1Q86X52 802 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 PPP1R13LQ8WUF5 828 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 OSBP2Q969R2 916 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 ING2Q9H160 280 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 ASNSD1Q9NWL6 643 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 CNOT8Q9UFF9 292 aaKnown RBP8.92□□□□□ -0.98
SCN9A-203ENST00000409672 JAK3P52333 1124 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 DMC1Q14565 340 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 ZNF658Q5TYW1 1059 aaPredicted RBP8.92□□□□□ -0.98
SCN9A-203ENST00000409672 ACAD9Q9H845 621 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 CHCHD3Q9NX63 227 aaKnown RBP8.92□□□□□ -0.98
SCN9A-203ENST00000409672 PCDHGB4Q9UN71 923 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 FAN1Q9Y2M0 1017 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 SNX9Q9Y5X1 595 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 GOLGA8RI6L899 631 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 TRIM32Q13049 653 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 C10orf120Q5SQS8 335 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 PID1Q7Z2X4 250 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 CRLF3Q8IUI8 442 aa8.92□□□□□ -0.98
SCN9A-203ENST00000409672 PPM1NQ8N819 430 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms