RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 TRAK2O60296 914 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 TBCAO75347 108 aaKnown RBP16.29■□□□□ 0.2
SUMO1-207ENST00000409498 ERLIN2O94905 339 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 GAP43P17677 238 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 ARF4P18085 180 aaPredicted RBP16.29■□□□□ 0.2
SUMO1-207ENST00000409498 ABCD1P33897 745 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 NCBP1Q09161 790 aaKnown RBP16.29■□□□□ 0.2
SUMO1-207ENST00000409498 LONRF3Q496Y0 759 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 FAM109BQ6ICB4 259 aaPredicted RBP16.29■□□□□ 0.2
SUMO1-207ENST00000409498 GPR153Q6NV75 609 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 DYMQ7RTS9 669 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 TAS1R3Q7RTX0 852 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 ZNF598Q86UK7 904 aaKnown RBP16.29■□□□□ 0.2
SUMO1-207ENST00000409498 NPAS4Q8IUM7 802 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 CEP57L1Q8IYX8 460 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 FMR1NBQ8N0W7 255 aaPredicted RBP16.29■□□□□ 0.2
SUMO1-207ENST00000409498 MYCT1Q8N699 235 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 KIFC3Q9BVG8 833 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 RC3H2Q9HBD1 1191 aaKnown RBP16.29■□□□□ 0.2
SUMO1-207ENST00000409498 OLFML3Q9NRN5 406 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 TMEM161AQ9NX61 479 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 PIN4Q9Y237 131 aaKnown RBP16.29■□□□□ 0.2
SUMO1-207ENST00000409498 PCDHA11Q9Y5I1 949 aa16.29■□□□□ 0.2
SUMO1-207ENST00000409498 GOLGA6L4A6NEF3 574 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 ZNF202O95125 648 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 EOMESO95936 686 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 PRKCBP05771 671 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 STAG3L1P0CL83 205 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 SKIP12755 728 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 RAB27AP51159 221 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 GTF2BQ00403 316 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 SNW1Q13573 536 aaKnown RBP16.28■□□□□ 0.2
SUMO1-207ENST00000409498 RAB30Q15771 203 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 UBXN11Q5T124 520 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 NOTUMQ6P988 496 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 MRPL10Q7Z7H8 261 aaKnown RBP16.28■□□□□ 0.2
SUMO1-207ENST00000409498 MYOCDQ8IZQ8 938 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 STAMQ92783 540 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 ZNF689Q96CS4 500 aaPredicted RBP16.28■□□□□ 0.2
SUMO1-207ENST00000409498 PAGE5Q96GU1 130 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 RAD9AQ99638 391 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 STRA6Q9BX79 667 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 PBX4Q9BYU1 374 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 TRIOBPQ9H2D6 2365 aa16.28■□□□□ 0.2
SUMO1-207ENST00000409498 GBF1Q92538 1859 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 PVALEFA0A1B0GWK0 134 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 GRXCR1A8MXD5 290 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 SLC16A4O15374 487 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 B4GALT5O43286 388 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 DGKIO75912 1065 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 EDN1P05305 212 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 EHHADHQ08426 723 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 KRBA2Q6ZNG9 492 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 ZNF720Q7Z2F6 126 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 HAUS6Q7Z4H7 955 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 ECHDC2Q86YB7 292 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 ELOA2Q8IYF1 753 aaPredicted RBP16.27■□□□□ 0.2
SUMO1-207ENST00000409498 CNNM3Q8NE01 707 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 SP7Q8TDD2 431 aaPredicted RBP16.27■□□□□ 0.2
SUMO1-207ENST00000409498 RSPH1Q8WYR4 309 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 TIGD1Q96MW7 591 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 FAM105AQ9NUU6 356 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 INSL6Q9Y581 213 aa16.27■□□□□ 0.2
SUMO1-207ENST00000409498 TMEM265A0A087WTH1 108 aa16.26■□□□□ 0.19
SUMO1-207ENST00000409498 SOX1O00570 391 aaPredicted RBP16.26■□□□□ 0.19
SUMO1-207ENST00000409498 PPP1R37O75864 691 aa16.26■□□□□ 0.19
SUMO1-207ENST00000409498 PIGRP01833 764 aa16.26■□□□□ 0.19
SUMO1-207ENST00000409498 ATF7P17544 494 aaPredicted RBP16.26■□□□□ 0.19
SUMO1-207ENST00000409498 FAM160A1Q05DH4 1040 aa16.26■□□□□ 0.19
SUMO1-207ENST00000409498 PRPF4BQ13523 1007 aaKnown RBP16.26■□□□□ 0.19
SUMO1-207ENST00000409498 NT5DC1Q5TFE4 455 aa16.26■□□□□ 0.19
SUMO1-207ENST00000409498 TWF2Q6IBS0 349 aaKnown RBP16.26■□□□□ 0.19
SUMO1-207ENST00000409498 KANK3Q6NY19 840 aa16.26■□□□□ 0.19
SUMO1-207ENST00000409498 UNC13DQ70J99 1090 aa16.26■□□□□ 0.19
SUMO1-207ENST00000409498 SFR1Q86XK3 245 aa16.26■□□□□ 0.19
SUMO1-207ENST00000409498 FAM178BQ8IXR5 827 aa16.26■□□□□ 0.19
SUMO1-207ENST00000409498 CCDC65Q8IXS2 484 aa16.26■□□□□ 0.19
SUMO1-207ENST00000409498 HVCN1Q96D96 273 aa16.26■□□□□ 0.19
SUMO1-207ENST00000409498 PTPRHQ9HD43 1115 aa16.26■□□□□ 0.19
SUMO1-207ENST00000409498 PANK4Q9NVE7 773 aa16.26■□□□□ 0.19
SUMO1-207ENST00000409498 TNFSF13BQ9Y275 285 aa16.26■□□□□ 0.19
SUMO1-207ENST00000409498 PCDHB7Q9Y5E2 793 aa16.26■□□□□ 0.19
SUMO1-207ENST00000409498 TTLL13PA6NNM8 815 aa16.25■□□□□ 0.19
SUMO1-207ENST00000409498 N4BP3O15049 544 aa16.25■□□□□ 0.19
SUMO1-207ENST00000409498 GTPBP6O43824 516 aaPredicted RBP16.25■□□□□ 0.19
SUMO1-207ENST00000409498 TLL1O43897 1013 aa16.25■□□□□ 0.19
SUMO1-207ENST00000409498 GADD45BO75293 160 aaPredicted RBP16.25■□□□□ 0.19
SUMO1-207ENST00000409498 PROZP22891 400 aa16.25■□□□□ 0.19
SUMO1-207ENST00000409498 UBE2HP62256 183 aa16.25■□□□□ 0.19
SUMO1-207ENST00000409498 CUL4BQ13620 913 aa16.25■□□□□ 0.19
SUMO1-207ENST00000409498 HERC4Q5GLZ8 1057 aaPredicted RBP16.25■□□□□ 0.19
SUMO1-207ENST00000409498 SLC27A1Q6PCB7 646 aa16.25■□□□□ 0.19
SUMO1-207ENST00000409498 ZPBP2Q6X784 338 aa16.25■□□□□ 0.19
SUMO1-207ENST00000409498 TMCO2Q7Z6W1 182 aaPredicted RBP16.25■□□□□ 0.19
SUMO1-207ENST00000409498 CPB2Q96IY4 423 aa16.25■□□□□ 0.19
SUMO1-207ENST00000409498 ACO2Q99798 780 aaKnown RBP16.25■□□□□ 0.19
SUMO1-207ENST00000409498 MRPL4Q9BYD3 311 aaKnown RBP16.25■□□□□ 0.19
SUMO1-207ENST00000409498 PDZD7Q9H5P4 517 aa16.25■□□□□ 0.19
SUMO1-207ENST00000409498 RNF19AQ9NV58 838 aa16.25■□□□□ 0.19
SUMO1-207ENST00000409498 MSRAQ9UJ68 235 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms