RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 ZNF302Q9NR11 478 aa10.81□□□□□ -0.68
CUL1-202ENST00000409469 PDGFCQ9NRA1 345 aa10.81□□□□□ -0.68
CUL1-202ENST00000409469 AIPL1Q9NZN9 384 aa10.81□□□□□ -0.68
CUL1-202ENST00000409469 CHORDC1Q9UHD1 332 aaPredicted RBP10.81□□□□□ -0.68
CUL1-202ENST00000409469 SAR1BQ9Y6B6 198 aa10.81□□□□□ -0.68
CUL1-202ENST00000409469 SSU72P8A0A1W2PR75 194 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 FARP2O94887 1054 aaPredicted RBP10.8□□□□□ -0.68
CUL1-202ENST00000409469 LCA5LO95447 670 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 EDN1P05305 212 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 DLATP10515 647 aaKnown RBP10.8□□□□□ -0.68
CUL1-202ENST00000409469 RNASE9P60153 205 aaKnown RBP10.8□□□□□ -0.68
CUL1-202ENST00000409469 SAMD3Q8N6K7 520 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 XXYLT1Q8NBI6 393 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 IQCDQ96DY2 449 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 BICD1Q96G01 975 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 TAF1DQ9H5J8 278 aaPredicted RBP10.8□□□□□ -0.68
CUL1-202ENST00000409469 ANKZF1Q9H8Y5 726 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 SUGCTQ9HAC7 445 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 PLCB1Q9NQ66 1216 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 ST7Q9NRC1 585 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 ANKEF1Q9NU02 776 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 SEPT11Q9NVA2 429 aaKnown RBP10.8□□□□□ -0.68
CUL1-202ENST00000409469 MYO1AQ9UBC5 1043 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 AGTPBP1Q9UPW5 1226 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 F8VZ95 297 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 GJB1P08034 283 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 HARSP12081 509 aaKnown RBP10.8□□□□□ -0.68
CUL1-202ENST00000409469 USP8P40818 1118 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 MATR3P43243 847 aaKnown RBP eCLIP10.8□□□□□ -0.683e-7■■■■■ 27.4
CUL1-202ENST00000409469 WNT7BP56706 349 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 JAM2P57087 298 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 EMC2Q15006 297 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 SNRNP35Q16560 246 aaKnown RBP10.8□□□□□ -0.68
CUL1-202ENST00000409469 MIS18BP1Q6P0N0 1132 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 XRRA1Q6P2D8 792 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 OTUD6AQ7L8S5 288 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 GLYCTKQ8IVS8 523 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 RNF217Q8TC41 542 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 ASAP3Q8TDY4 903 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 TRAPPC12Q8WVT3 735 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 POMGNT1Q8WZA1 660 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 ZBTB45Q96K62 511 aaPredicted RBP10.8□□□□□ -0.68
CUL1-202ENST00000409469 TMEM206Q9H813 350 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 UBE4BO95155 1302 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 MYPNQ86TC9 1320 aa10.8□□□□□ -0.68
CUL1-202ENST00000409469 GSTTP1A0A1W2PQM5 241 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 LRRIQ4A6NIV6 560 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 TTLL13PA6NNM8 815 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 PALMO75781 387 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 KRT13P13646 458 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 TCF7P36402 384 aaPredicted RBP10.79□□□□□ -0.68
CUL1-202ENST00000409469 C2orf54Q08AI8 447 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 SCARA3Q6AZY7 606 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 ZNF280DQ6N043 979 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 PROCA1Q8NCQ7 364 aaPredicted RBP10.79□□□□□ -0.68
CUL1-202ENST00000409469 LMO3Q8TAP4 145 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 MS4A14Q96JA4 679 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 SENP7Q9BQF6 1050 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 FAM213AQ9BRX8 229 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 PI4K2AQ9BTU6 479 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 EDEM3Q9BZQ6 932 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 ATP6V0A4Q9HBG4 840 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 UBE2TQ9NPD8 197 aaPredicted RBP10.79□□□□□ -0.68
CUL1-202ENST00000409469 MYH9P35579 1960 aaKnown RBP10.79□□□□□ -0.68
CUL1-202ENST00000409469 IGSF9BQ9UPX0 1349 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 CTAGE15A4D2H0 777 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 CTAGE8P0CG41 777 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 ABCB4P21439 1286 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 SMTNP53814 917 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 ZBTB41Q5SVQ8 909 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 GPAT2Q6NUI2 795 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 USP50Q70EL3 339 aaPredicted RBP10.79□□□□□ -0.68
CUL1-202ENST00000409469 CTAGE6Q86UF2 777 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 CTAGE4Q8IX94 777 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 DNERQ8NFT8 737 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 CAGE1Q8TC20 777 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 PPP1R13LQ8WUF5 828 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 SEMA4DQ92854 862 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 CDHR1Q96JP9 859 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 MKNK1Q9BUB5 465 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 CCDC94Q9BW85 323 aaPredicted RBP10.79□□□□□ -0.68
CUL1-202ENST00000409469 TMEM117Q9H0C3 514 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 TAS2R14Q9NYV8 317 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 APEX2Q9UBZ4 518 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 HYOU1Q9Y4L1 999 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 CARNS1A5YM72 827 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 GLTPD2A6NH11 291 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 FOXN3O00409 490 aaPredicted RBP10.79□□□□□ -0.68
CUL1-202ENST00000409469 DDX3XO00571 662 aaKnown RBP eCLIP10.79□□□□□ -0.688e-16■■■■□ 19.3
CUL1-202ENST00000409469 TACC1O75410 805 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 DGAT1O75907 488 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 OATP04181 439 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 MAPTP10636 758 aaKnown RBP10.79□□□□□ -0.68
CUL1-202ENST00000409469 ACOT2P49753 483 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 MAP4K3Q8IVH8 894 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 LRRC71Q8N4P6 559 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 LNX1Q8TBB1 728 aaPredicted RBP10.79□□□□□ -0.68
CUL1-202ENST00000409469 U2AF1L4Q8WU68 220 aaKnown RBP10.79□□□□□ -0.68
CUL1-202ENST00000409469 SLC20A1Q8WUM9 679 aa10.79□□□□□ -0.68
CUL1-202ENST00000409469 PPP1R16BQ96T49 567 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms