RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 LBHD1Q9BQE6 289 aaPredicted RBP26.72■■□□□ 1.87
SPIRE1-202ENST00000409402 NUP85Q9BW27 656 aa26.72■■□□□ 1.87
SPIRE1-202ENST00000409402 CAPN7Q9Y6W3 813 aa26.72■■□□□ 1.87
SPIRE1-202ENST00000409402 ABCA6Q8N139 1617 aa26.72■■□□□ 1.87
SPIRE1-202ENST00000409402 EIF3BP55884 814 aaKnown RBP26.72■■□□□ 1.87
SPIRE1-202ENST00000409402 NME3Q13232 169 aa26.72■■□□□ 1.87
SPIRE1-202ENST00000409402 ZKSCAN8Q15776 578 aaPredicted RBP26.72■■□□□ 1.87
SPIRE1-202ENST00000409402 ABCA9Q8IUA7 1624 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 KRT7P08729 469 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 YWHAHQ04917 246 aaPredicted RBP26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 TTC19Q6DKK2 380 aaPredicted RBP26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 HEMGNQ9BXL5 484 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 GOLPH3LQ9H4A5 285 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 CNOT10Q9H9A5 744 aaKnown RBP26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 ABHD10Q9NUJ1 306 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 GNGT2O14610 69 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 FBXL13Q8NEE6 735 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 SCG3Q8WXD2 468 aaKnown RBP26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 MOCS2O96007 188 aaPredicted RBP26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 PRR29P0C7W0 189 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 DRP2Q13474 957 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 IER5Q5VY09 327 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 CC2D1AQ6P1N0 951 aaPredicted RBP26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 NUDT18Q6ZVK8 323 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 PDZD8Q8NEN9 1154 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 KRT37O76014 449 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 ACCSLQ4AC99 568 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 GPRC5AQ8NFJ5 357 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 FGD4Q96M96 766 aa26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 TACO1Q9BSH4 297 aaKnown RBP26.71■■□□□ 1.87
SPIRE1-202ENST00000409402 RAD51Q06609 339 aa26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 FMR1NBQ8N0W7 255 aaPredicted RBP26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 DDX50Q9BQ39 737 aaKnown RBP26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 STXBP3O00186 592 aa26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 ATP8B1O43520 1251 aa26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 CTNND1O60716 968 aaKnown RBP26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 CELF2O95319 508 aaKnown RBP26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 GBP7Q8N8V2 638 aaPredicted RBP26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 AGBL3Q8NEM8 1001 aa26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 SAYSD1Q9NPB0 183 aa26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 PCSK1NQ9UHG2 260 aa26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 MADDQ8WXG6 1647 aa26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 EMSYQ7Z589 1322 aa26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 NR3C2P08235 984 aa26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 TSGA10IPQ3SY00 556 aa26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 SPATA2LQ8IUW3 424 aaPredicted RBP26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 PRR12Q9ULL5 1215 aa26.7■■□□□ 1.86
SPIRE1-202ENST00000409402 MAGEB2O15479 319 aa26.69■■□□□ 1.86
SPIRE1-202ENST00000409402 ATG16L1Q676U5 607 aa26.69■■□□□ 1.86
SPIRE1-202ENST00000409402 ANKRD13AQ8IZ07 590 aa26.69■■□□□ 1.86
SPIRE1-202ENST00000409402 KIF3CO14782 793 aa26.69■■□□□ 1.86
SPIRE1-202ENST00000409402 BPIFA3Q9BQP9 254 aa26.69■■□□□ 1.86
SPIRE1-202ENST00000409402 FAM102AQ5T9C2 384 aaPredicted RBP26.69■■□□□ 1.86
SPIRE1-202ENST00000409402 TADA2BQ86TJ2 420 aa26.69■■□□□ 1.86
SPIRE1-202ENST00000409402 RGL1Q9NZL6 768 aa26.69■■□□□ 1.86
SPIRE1-202ENST00000409402 USP42Q9H9J4 1324 aaKnown RBP26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 DEFB129Q9H1M3 183 aa26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 DDX56Q9NY93 547 aaKnown RBP26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 CTSHP09668 335 aa26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 ITPRIPL1Q6GPH6 555 aa26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 H3BRJ5 948 aa26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 SNX2O60749 519 aa26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 GFPT1Q06210 699 aaPredicted RBP26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 NSUN2Q08J23 767 aaKnown RBP eCLIP26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 PRAMEF18Q5VWM3 479 aa26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 ASIC4Q96FT7 647 aa26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 FRMD5Q7Z6J6 570 aa26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 CHST13Q8NET6 341 aa26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 DNAJC17Q9NVM6 304 aaKnown RBP26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 GRIK1P39086 918 aa26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 HEATR6Q6AI08 1181 aaKnown RBP26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 SPON2Q9BUD6 331 aa26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 HACD3Q9P035 362 aa26.68■■□□□ 1.86
SPIRE1-202ENST00000409402 RARBP10826 455 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 C6orf118Q5T5N4 469 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 SLC13A4Q9UKG4 626 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 TBX3O15119 743 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 TAP1Q03518 808 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 ADCY2Q08462 1091 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 EZH2Q15910 746 aaKnown RBP26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 FBXO33Q7Z6M2 555 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 SPDL1Q96EA4 605 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 TADA2AO75478 443 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 TRIM49P0CI25 452 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 TRIM49CP0CI26 452 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 CDK17Q00537 523 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 EDEM3Q9BZQ6 932 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 ORC6Q9Y5N6 252 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 IQSEC2Q5JU85 1478 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 KIF28PB7ZC32 967 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 PDXKO00764 312 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 SLC7A5Q01650 507 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 SARM1Q6SZW1 724 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 RNF25Q96BH1 459 aaPredicted RBP26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 NEXMIFQ5QGS0 1516 aa26.67■■□□□ 1.86
SPIRE1-202ENST00000409402 SESN3P58005 492 aa26.66■■□□□ 1.86
SPIRE1-202ENST00000409402 TMEM39BQ9GZU3 492 aa26.66■■□□□ 1.86
SPIRE1-202ENST00000409402 SEC31AO94979 1220 aaKnown RBP26.66■■□□□ 1.86
SPIRE1-202ENST00000409402 ACSL3O95573 720 aa26.66■■□□□ 1.86
SPIRE1-202ENST00000409402 FTLP02792 175 aaPredicted RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms