RNA–Protein interactions for RNA: ENST00000409299.7

PXMP4-203, Transcript of peroxisomal membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PXMP4, Length 5,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXMP4-203ENST00000409299 PPRC1Q5VV67 1664 aaKnown RBP13□□□□□ -0.33
PXMP4-203ENST00000409299 CD58P19256 250 aa13□□□□□ -0.33
PXMP4-203ENST00000409299 PHKA2P46019 1235 aa13□□□□□ -0.33
PXMP4-203ENST00000409299 AP3M2P53677 418 aa13□□□□□ -0.33
PXMP4-203ENST00000409299 ADGRF4Q8IZF3 695 aa13□□□□□ -0.33
PXMP4-203ENST00000409299 ENAHQ8N8S7 591 aaPredicted RBP13□□□□□ -0.33
PXMP4-203ENST00000409299 RBM46Q8TBY0 533 aaKnown RBP13□□□□□ -0.33
PXMP4-203ENST00000409299 NDE1Q9NXR1 346 aa13□□□□□ -0.33
PXMP4-203ENST00000409299 ZFP69BQ9UJL9 534 aa13□□□□□ -0.33
PXMP4-203ENST00000409299 CPSF3Q9UKF6 684 aaKnown RBP13□□□□□ -0.33
PXMP4-203ENST00000409299 SCAF8Q9UPN6 1271 aaKnown RBP13□□□□□ -0.33
PXMP4-203ENST00000409299 FRMD3A2A2Y4 597 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 RASA4BC9J798 803 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 RASA4O43374 803 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 HSPA4LO95757 839 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 NCF2P19878 526 aaPredicted RBP12.99□□□□□ -0.33
PXMP4-203ENST00000409299 KRT76Q01546 638 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 GFPT1Q06210 699 aaPredicted RBP12.99□□□□□ -0.33
PXMP4-203ENST00000409299 ADCY1Q08828 1119 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 QRICH1Q2TAL8 776 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 SCARA5Q6ZMJ2 495 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 SAMD7Q7Z3H4 446 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 TBC1D1Q86TI0 1168 aaPredicted RBP12.99□□□□□ -0.33
PXMP4-203ENST00000409299 SNF8Q96H20 258 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 VPS39Q96JC1 886 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 MTFR1LQ9H019 292 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 APOBEC2Q9Y235 224 aaKnown RBP12.99□□□□□ -0.33
PXMP4-203ENST00000409299 SNX24Q9Y343 169 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 CEP170BQ9Y4F5 1589 aaPredicted RBP12.99□□□□□ -0.33
PXMP4-203ENST00000409299 APOEP02649 317 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 COG2Q14746 738 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 COL23A1Q86Y22 540 aaPredicted RBP12.99□□□□□ -0.33
PXMP4-203ENST00000409299 ADAMTS13Q76LX8 1427 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 TRIM49BA6NDI0 452 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 SFI1A8K8P3 1242 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 ZNF667Q5HYK9 610 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 ICE2Q659A1 982 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 INTS2Q9H0H0 1204 aaKnown RBP12.99□□□□□ -0.33
PXMP4-203ENST00000409299 PIK3C2BO00750 1634 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 GYG2O15488 501 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 NTSR2O95665 410 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 NSUN4Q96CB9 384 aaKnown RBP12.99□□□□□ -0.33
PXMP4-203ENST00000409299 ZDHHC9Q9Y397 364 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 PAPOLAP51003 745 aaKnown RBP12.99□□□□□ -0.33
PXMP4-203ENST00000409299 C9orf131Q5VYM1 1079 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 SWSAP1Q6NVH7 229 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 ACAD11Q709F0 780 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 ELOA2Q8IYF1 753 aaPredicted RBP12.99□□□□□ -0.33
PXMP4-203ENST00000409299 ZNF280CQ8ND82 737 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 ZNF564Q8TBZ8 553 aaPredicted RBP12.99□□□□□ -0.33
PXMP4-203ENST00000409299 URGCPQ8TCY9 931 aa12.99□□□□□ -0.33
PXMP4-203ENST00000409299 TMPRSS15P98073 1019 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 ARHGAP18Q8N392 663 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 COG1Q8WTW3 980 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 RNF139Q8WU17 664 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 SCG3Q8WXD2 468 aaKnown RBP12.98□□□□□ -0.33
PXMP4-203ENST00000409299 TIPINQ9BVW5 301 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 SENP1Q9P0U3 644 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 GSG1L2A8MUP6 293 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 RPS12P25398 132 aaKnown RBP12.98□□□□□ -0.33
PXMP4-203ENST00000409299 USP11P51784 963 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 MCUQ8NE86 351 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 RFFLQ8WZ73 363 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 CCL15-CCL14A0A0B4J2E2 113 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 KBTBD13C9JR72 458 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 HAUS5O94927 633 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 CASP2P42575 452 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 MAGOHP61326 146 aaKnown RBP12.98□□□□□ -0.33
PXMP4-203ENST00000409299 MAPK6Q16659 721 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 CCL15Q16663 113 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 THEM5Q8N1Q8 247 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 TOPORSQ9NS56 1045 aaPredicted RBP12.98□□□□□ -0.33
PXMP4-203ENST00000409299 C19orf81C9J6K1 198 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 SRGAP2O75044 1071 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 KRT7P08729 469 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 LDHDQ86WU2 507 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 RHPN2Q8IUC4 686 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 OR6B3Q8NGW1 331 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 CHMP6Q96FZ7 201 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.98□□□□□ -0.33
PXMP4-203ENST00000409299 NEXMIFQ5QGS0 1516 aa12.98□□□□□ -0.33
PXMP4-203ENST00000409299 ASAP2O43150 1006 aa12.97□□□□□ -0.33
PXMP4-203ENST00000409299 CIITAP33076 1130 aa12.97□□□□□ -0.33
PXMP4-203ENST00000409299 CDC42EP5Q6NZY7 148 aa12.97□□□□□ -0.33
PXMP4-203ENST00000409299 SHC4Q6S5L8 630 aa12.97□□□□□ -0.33
PXMP4-203ENST00000409299 OR6J1Q8NGC5 347 aa12.97□□□□□ -0.33
PXMP4-203ENST00000409299 TSC22D3Q99576 134 aa12.97□□□□□ -0.33
PXMP4-203ENST00000409299 TMEM260Q9NX78 707 aa12.97□□□□□ -0.33
PXMP4-203ENST00000409299 GABBR1Q9UBS5 961 aa12.97□□□□□ -0.33
PXMP4-203ENST00000409299 A0A1B0GTH6 734 aa12.97□□□□□ -0.33
PXMP4-203ENST00000409299 KIAA0391O15091 583 aaKnown RBP12.97□□□□□ -0.33
PXMP4-203ENST00000409299 CYP2B6P20813 491 aa12.97□□□□□ -0.33
PXMP4-203ENST00000409299 SLC1A1P43005 524 aa12.97□□□□□ -0.33
PXMP4-203ENST00000409299 EXOSC10Q01780 885 aaKnown RBP12.97□□□□□ -0.33
PXMP4-203ENST00000409299 DYNC1I2Q13409 638 aaKnown RBP12.97□□□□□ -0.33
PXMP4-203ENST00000409299 BEND6Q5SZJ8 279 aaPredicted RBP12.97□□□□□ -0.33
PXMP4-203ENST00000409299 PADI6Q6TGC4 694 aa12.97□□□□□ -0.33
PXMP4-203ENST00000409299 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.97□□□□□ -0.33
PXMP4-203ENST00000409299 NUP85Q9BW27 656 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms