RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 NBPF9Q3BBW0 867 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 KLHDC7AQ5VTJ3 777 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 NAA35Q5VZE5 725 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 CYFIP1Q7L576 1253 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 GPRC5AQ8NFJ5 357 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 SAAL1Q96ER3 474 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 PDCD2LQ9BRP1 358 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 TRIM7Q9C029 511 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 AGPAT3Q9NRZ7 376 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 COMMD10Q9Y6G5 202 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 TRPM3Q9HCF6 1732 aaPredicted RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 PLIN4Q96Q06 1357 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 LRRC10BA6NIK2 292 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 GOLGA8SH3BPF8 625 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 MCF2LO15068 1137 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ZRANB2O95218 330 aaKnown RBP eCLIP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 IL18RAPO95256 599 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 OATP04181 439 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 SNHG28P0DPA3 235 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 CD58P19256 250 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 GARTP22102 1010 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 BRD2P25440 801 aaKnown RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 CXCR5P32302 372 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 GCLCP48506 637 aaPredicted RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 SLC26A2P50443 739 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 TFDP2Q14188 446 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 SNRNP35Q16560 246 aaKnown RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 BZW1Q7L1Q6 419 aaKnown RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ZNF677Q86XU0 584 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 RFX6Q8HWS3 928 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 RHPN2Q8IUC4 686 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 GPC2Q8N158 579 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 APOL6Q9BWW8 343 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 LRRC4Q9HBW1 653 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 AGO4Q9HCK5 861 aaKnown RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ABCB6Q9NP58 842 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 AGPAT5Q9NUQ2 364 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 PRMT7Q9NVM4 692 aaPredicted RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 SUCLA2Q9P2R7 463 aaPredicted RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 IP6K2Q9UHH9 426 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ANAPC7Q9UJX3 599 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 TRAF3IP3Q9Y228 551 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 H7C0C1 242 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 EXTL3O43909 919 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ZC3H11AO75152 810 aaKnown RBP eCLIP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 TJP3O95049 919 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 FGGP02679 453 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 TMEM253P0C7T8 217 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 PNMA6AP0CW24 399 aaPredicted RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ARP10275 920 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 CHRNA3P32297 505 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ATP5OP48047 213 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ACTR2P61160 394 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 UAP1Q16222 522 aaPredicted RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 PTPROQ16827 1216 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 COBLL1Q53SF7 1204 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 MFSD14CQ5VZR4 134 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 OR6B2Q6IFH4 312 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 CC2D1AQ6P1N0 951 aaPredicted RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 TMEM270Q6UE05 265 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 SESTD1Q86VW0 696 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 GLYCTKQ8IVS8 523 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 RNF169Q8NCN4 708 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ZNF564Q8TBZ8 553 aaPredicted RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 TMC2Q8TDI7 906 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 TNFRSF25Q93038 417 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ATP2A3Q93084 1043 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 EXOC4Q96A65 974 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 HEXIM2Q96MH2 286 aaKnown RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 GDAP1L1Q96MZ0 367 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 WDR24Q96S15 920 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 WDR18Q9BV38 432 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 RUSC1Q9BVN2 902 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 CAPS2Q9BXY5 557 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 FAM49AQ9H0Q0 323 aaPredicted RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 SEMA6BQ9H3T3 888 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 PXMP2Q9NR77 195 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 WDR35Q9P2L0 1181 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ANAPC5Q9UJX4 755 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 RRN3P2A6NIE6 340 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 PRPSAP2O60256 369 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 RNF40O75150 1001 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 SUPT20HL2P0C7V6 817 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 TGFB3P10600 412 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 GNA15P30679 374 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 INPP5BP32019 993 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ARL4AP40617 200 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 OSTNP61366 133 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 GNGT1P63211 74 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 NBPF12Q5TAG4 269 aaPredicted RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 TRAPPC11Q7Z392 1133 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ADAT2Q7Z6V5 191 aaKnown RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 CNPY4Q8N129 248 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 RNF149Q8NC42 400 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ZNF507Q8TCN5 953 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 SMC6Q96SB8 1091 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 FMO2Q99518 471 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 KATNAL1Q9BW62 490 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms