RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 NEK9Q8TD19 979 aa19.93■□□□□ 0.78
EWSR1-207ENST00000406548 ACER1Q8TDN7 264 aa19.93■□□□□ 0.78
EWSR1-207ENST00000406548 VTI1AQ96AJ9 217 aa19.93■□□□□ 0.78
EWSR1-207ENST00000406548 KIAA0391O15091 583 aaKnown RBP19.92■□□□□ 0.78
EWSR1-207ENST00000406548 FTLP02792 175 aaPredicted RBP19.92■□□□□ 0.78
EWSR1-207ENST00000406548 CDR1P51861 262 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 PMS2P54278 862 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 DRG2P55039 364 aaKnown RBP19.92■□□□□ 0.78
EWSR1-207ENST00000406548 CETN1Q12798 172 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 PLCB4Q15147 1175 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 AADACL2Q6P093 401 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 ZDHHC24Q6UX98 284 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 ARMC9Q7Z3E5 817 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 ZSWIM1Q9BR11 485 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.92■□□□□ 0.781e-9■□□□□ 8.3
EWSR1-207ENST00000406548 GOPCQ9HD26 462 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 TMX2Q9Y320 296 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 SNX24Q9Y343 169 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 MRPL11Q9Y3B7 192 aaKnown RBP19.92■□□□□ 0.78
EWSR1-207ENST00000406548 CHRNA3P32297 505 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 PLTPP55058 493 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 PADI6Q6TGC4 694 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 KRT35Q92764 455 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 C18orf8Q96DM3 657 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 CABS1Q96KC9 395 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 PABPC3Q9H361 631 aaKnown RBP19.92■□□□□ 0.78
EWSR1-207ENST00000406548 PCIF1Q9H4Z3 704 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 HERC5Q9UII4 1024 aaKnown RBP19.92■□□□□ 0.78
EWSR1-207ENST00000406548 BCS1LQ9Y276 419 aa19.92■□□□□ 0.78
EWSR1-207ENST00000406548 IPO5O00410 1097 aaKnown RBP19.91■□□□□ 0.78
EWSR1-207ENST00000406548 P4HA2O15460 535 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 CAND2O75155 1236 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 SHBGP04278 402 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 PTGIRP43119 386 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 MARCKSL1P49006 195 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 VAMP7P51809 220 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 PPP3CAQ08209 521 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 EPC2Q52LR7 807 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 CC2D2BQ6DHV5 1058 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 CCDC121Q6ZUS5 278 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 RPUSD2Q8IZ73 545 aaKnown RBP19.91■□□□□ 0.78
EWSR1-207ENST00000406548 SEC16BQ96JE7 1060 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 TMEM206Q9H813 350 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 TMEM110-MUSTN1A8MSY1 372 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 TISP43B9A030 160 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 HMGB2P26583 209 aaKnown RBP19.91■□□□□ 0.78
EWSR1-207ENST00000406548 GPC5P78333 572 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 ALCAMQ13740 583 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 DENND2CQ68D51 928 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 CCDC13Q8IYE1 715 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 PRELID2Q8N945 189 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 FBXO25Q8TCJ0 367 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 TATDN2Q93075 761 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 CEP89Q96ST8 783 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 PNMA2Q9UL42 364 aa19.91■□□□□ 0.78
EWSR1-207ENST00000406548 DDX39AO00148 427 aaKnown RBP19.9■□□□□ 0.78
EWSR1-207ENST00000406548 PLSCR1O15162 318 aa19.9■□□□□ 0.78
EWSR1-207ENST00000406548 CTNNA2P26232 953 aa19.9■□□□□ 0.78
EWSR1-207ENST00000406548 GCLMP48507 274 aa19.9■□□□□ 0.78
EWSR1-207ENST00000406548 PRMT6Q96LA8 375 aaPredicted RBP19.9■□□□□ 0.78
EWSR1-207ENST00000406548 RPS6KC1Q96S38 1066 aa19.9■□□□□ 0.78
EWSR1-207ENST00000406548 RIT2Q99578 217 aa19.9■□□□□ 0.78
EWSR1-207ENST00000406548 ACTR5Q9H9F9 607 aaPredicted RBP19.9■□□□□ 0.78
EWSR1-207ENST00000406548 GRHL1Q9NZI5 618 aa19.9■□□□□ 0.78
EWSR1-207ENST00000406548 LARSQ9P2J5 1176 aaKnown RBP19.9■□□□□ 0.78
EWSR1-207ENST00000406548 BACH1O14867 736 aa19.9■□□□□ 0.78
EWSR1-207ENST00000406548 GGPS1O95749 300 aa19.9■□□□□ 0.78
EWSR1-207ENST00000406548 MAPTP10636 758 aaKnown RBP19.9■□□□□ 0.78
EWSR1-207ENST00000406548 GBP1P32455 592 aa19.9■□□□□ 0.78
EWSR1-207ENST00000406548 BYSLQ13895 437 aaKnown RBP19.9■□□□□ 0.78
EWSR1-207ENST00000406548 ZNF746Q6NUN9 644 aaPredicted RBP19.9■□□□□ 0.78
EWSR1-207ENST00000406548 MAEAQ7L5Y9 396 aa19.9■□□□□ 0.78
EWSR1-207ENST00000406548 COL23A1Q86Y22 540 aaPredicted RBP19.9■□□□□ 0.78
EWSR1-207ENST00000406548 C12orf56Q8IXR9 622 aa19.9■□□□□ 0.78
EWSR1-207ENST00000406548 CACNA2D3Q8IZS8 1091 aa19.9■□□□□ 0.78
EWSR1-207ENST00000406548 CHURC1Q8WUH1 139 aa19.9■□□□□ 0.78
EWSR1-207ENST00000406548 TMEM174Q8WUU8 243 aa19.9■□□□□ 0.78
EWSR1-207ENST00000406548 PCYOX1Q9UHG3 505 aa19.9■□□□□ 0.78
EWSR1-207ENST00000406548 RTN2O75298 545 aa19.89■□□□□ 0.77
EWSR1-207ENST00000406548 MMP10P09238 476 aa19.89■□□□□ 0.77
EWSR1-207ENST00000406548 SWT1Q5T5J6 900 aaKnown RBP19.89■□□□□ 0.77
EWSR1-207ENST00000406548 SEL1L2Q5TEA6 688 aa19.89■□□□□ 0.77
EWSR1-207ENST00000406548 RNF25Q96BH1 459 aaPredicted RBP19.89■□□□□ 0.77
EWSR1-207ENST00000406548 CENPTQ96BT3 561 aa19.89■□□□□ 0.77
EWSR1-207ENST00000406548 PGM2Q96G03 612 aa19.89■□□□□ 0.77
EWSR1-207ENST00000406548 ACCSQ96QU6 501 aa19.89■□□□□ 0.77
EWSR1-207ENST00000406548 MXRA8Q9BRK3 442 aa19.89■□□□□ 0.77
EWSR1-207ENST00000406548 CBWD1Q9BRT8 395 aa19.89■□□□□ 0.77
EWSR1-207ENST00000406548 RPTORQ8N122 1335 aa19.89■□□□□ 0.77
EWSR1-207ENST00000406548 CCDC169A6NNP5 214 aa19.88■□□□□ 0.77
EWSR1-207ENST00000406548 PODXLO00592 558 aa19.88■□□□□ 0.77
EWSR1-207ENST00000406548 MTA2O94776 668 aa19.88■□□□□ 0.77
EWSR1-207ENST00000406548 COMTP21964 271 aa19.88■□□□□ 0.77
EWSR1-207ENST00000406548 RPL21P46778 160 aaKnown RBP19.88■□□□□ 0.77
EWSR1-207ENST00000406548 C1orf220Q5T0J3 134 aa19.88■□□□□ 0.77
EWSR1-207ENST00000406548 ERMARDQ5T6L9 678 aa19.88■□□□□ 0.77
EWSR1-207ENST00000406548 MIER3Q7Z3K6 550 aa19.88■□□□□ 0.77
EWSR1-207ENST00000406548 MDM1Q8TC05 714 aa19.88■□□□□ 0.77
EWSR1-207ENST00000406548 XPO6Q96QU8 1125 aaKnown RBP19.88■□□□□ 0.77
EWSR1-207ENST00000406548 FAM129AQ9BZQ8 928 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms