RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 IFT88Q13099 833 aa12.58□□□□□ -0.39
RAPGEF3-204ENST00000405493 STAG2Q8N3U4 1231 aa12.58□□□□□ -0.39
RAPGEF3-204ENST00000405493 LSM7Q9UK45 103 aaKnown RBP12.58□□□□□ -0.39
RAPGEF3-204ENST00000405493 SCINQ9Y6U3 715 aa12.58□□□□□ -0.39
RAPGEF3-204ENST00000405493 CYBBP04839 570 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 VCAM1P19320 739 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 EIF4A3P38919 411 aaKnown RBP12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 DUOXA2Q1HG44 320 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 ZNF746Q6NUN9 644 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 ARHGAP24Q8N264 748 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 RNF208Q9H0X6 261 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 STAP1Q9ULZ2 295 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 CA12O43570 354 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 UPP2O95045 317 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 RPS6P62753 249 aaKnown RBP12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 E2F4Q16254 413 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 PPP4R1Q8TF05 950 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 TMEM169Q96HH4 297 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 HPCAL4Q9UM19 191 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 PRPSAP2O60256 369 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 SAT1P21673 171 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 RPAINQ86UA6 219 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 SFR1Q86XK3 245 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 TMEM35BQ8NCS4 154 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 UPF1Q92900 1129 aaKnown RBP eCLIP12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 SCYL1Q96KG9 808 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 VTA1Q9NP79 307 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 HOMER3Q9NSC5 361 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 LRRC4BQ9NT99 713 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 ANKEF1Q9NU02 776 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 MAD1L1Q9Y6D9 718 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 KLRK1P26718 216 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 RAD51Q06609 339 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 E2F5Q15329 346 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 MMS22LQ6ZRQ5 1243 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 GPD1LQ8N335 351 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 RNF10Q8N5U6 811 aaKnown RBP12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 CFAP57Q96MR6 1250 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 MTG1Q9BT17 334 aaPredicted RBP12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 GOLPH3LQ9H4A5 285 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 PCDHA13Q9Y5I0 950 aa12.58□□□□□ -0.4
RAPGEF3-204ENST00000405493 GOLGA8IPA6NC78 632 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 GOLGA8JA6NMD2 632 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 SFI1A8K8P3 1242 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 EPHB1P54762 984 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 NFIAQ12857 509 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 C10orf76Q5T2E6 689 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 ENOSF1Q7L5Y1 443 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 MAGOHBQ96A72 148 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 AGBL1Q96MI9 1066 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 TACO1Q9BSH4 297 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 GOLGA8SH3BPF8 625 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 ERICH1Q86X53 443 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 AGO2Q9UKV8 859 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 HIP1RO75146 1068 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 ZNF189O75820 626 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 SERPING1P05155 500 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 ALDH7A1P49419 539 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 C4orf50Q6ZRC1 276 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 SRBD1Q8N5C6 995 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 OXER1Q8TDS5 423 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 SH3TC2Q8TF17 1288 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 PRPF31Q8WWY3 499 aaKnown RBP12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 CAMKK2Q96RR4 588 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 FAM213AQ9BRX8 229 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 ABHD16BQ9H3Z7 469 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 JMJD4Q9H9V9 463 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 PPME1Q9Y570 386 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 COG7P83436 770 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 STILQ15468 1287 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 NXNQ6DKJ4 435 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 NOTUMQ6P988 496 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 SCARA5Q6ZMJ2 495 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 TACC3Q9Y6A5 838 aa12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 MED1Q15648 1581 aaPredicted RBP12.57□□□□□ -0.4
RAPGEF3-204ENST00000405493 POTECB2RU33 542 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 APOEP02649 317 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 TGFB3P10600 412 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 THPOP40225 353 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 YWHAGP61981 247 aaKnown RBP eCLIP12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 KRT31Q15323 416 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 ARHGAP15Q53QZ3 475 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 SHCBP1Q8NEM2 672 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 APPL2Q8NEU8 664 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 BPIFA3Q9BQP9 254 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 ZCCHC17Q9NP64 241 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 SCAF8Q9UPN6 1271 aaKnown RBP12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 KRT1P04264 644 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 RBP5P82980 135 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 HAUS6Q7Z4H7 955 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 EPB41L5Q9HCM4 733 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 KLHL14Q9P2G3 628 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 PHLPP1O60346 1717 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 E9PMD0 336 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 CLTAP09496 248 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 ZNF18P17022 549 aa12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 SPATA2LQ8IUW3 424 aaPredicted RBP12.56□□□□□ -0.4
RAPGEF3-204ENST00000405493 CCDC170Q8IYT3 715 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms