RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 TDRD3Q9H7E2 651 aaKnown RBP11.59□□□□□ -0.55
CLIP4-204ENST00000404424 ERVK-5Q9HDB9 667 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 UBE2TQ9NPD8 197 aaPredicted RBP11.59□□□□□ -0.55
CLIP4-204ENST00000404424 CTTNBP2NLQ9P2B4 639 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 CNOT7Q9UIV1 285 aaKnown RBP11.59□□□□□ -0.55
CLIP4-204ENST00000404424 USP20Q9Y2K6 914 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 EMSYQ7Z589 1322 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 RBBP6Q7Z6E9 1792 aaKnown RBP11.59□□□□□ -0.55
CLIP4-204ENST00000404424 K7ENM7 598 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 IPO5O00410 1097 aaKnown RBP11.59□□□□□ -0.55
CLIP4-204ENST00000404424 KIAA0391O15091 583 aaKnown RBP11.59□□□□□ -0.55
CLIP4-204ENST00000404424 MTA2O94776 668 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 FTLP02792 175 aaPredicted RBP11.59□□□□□ -0.55
CLIP4-204ENST00000404424 GZMAP12544 262 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 VAMP7P51809 220 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 RRP1BQ14684 758 aaKnown RBP11.59□□□□□ -0.55
CLIP4-204ENST00000404424 SLC30A10Q6XR72 485 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 PALB2Q86YC2 1186 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 DAW1Q8N136 415 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 ACCSQ96QU6 501 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 FAM129AQ9BZQ8 928 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 WNT8AQ9H1J5 351 aa11.59□□□□□ -0.55
CLIP4-204ENST00000404424 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.59□□□□□ -0.55
CLIP4-204ENST00000404424 UBAP1LF5GYI3 381 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 LRRN2O75325 713 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 ARP10275 920 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 CTNNA2P26232 953 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 SMTNP53814 917 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 ZNF211Q13398 564 aaPredicted RBP11.58□□□□□ -0.56
CLIP4-204ENST00000404424 EPC2Q52LR7 807 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 SEL1L2Q5TEA6 688 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 DENND2CQ68D51 928 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 KCNV1Q6PIU1 500 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 FAM160B2Q86V87 743 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 CACNA2D3Q8IZS8 1091 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 RDH13Q8NBN7 331 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 TATDN2Q93075 761 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 SEC16BQ96JE7 1060 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 ZSWIM1Q9BR11 485 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 DEFB129Q9H1M3 183 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 MTRF1LQ9UGC7 380 aaKnown RBP11.58□□□□□ -0.56
CLIP4-204ENST00000404424 P4HBP07237 508 aaKnown RBP11.58□□□□□ -0.56
CLIP4-204ENST00000404424 ECE1P42892 770 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 PTGIRP43119 386 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 PLTPP55058 493 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 ERMARDQ5T6L9 678 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 GKAP1Q5VSY0 366 aaPredicted RBP11.58□□□□□ -0.56
CLIP4-204ENST00000404424 CCDC174Q6PII3 467 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 PADI6Q6TGC4 694 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 TAX1BP1Q86VP1 789 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 GLG1Q92896 1179 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 ZNF622Q969S3 477 aaKnown RBP eCLIP11.58□□□□□ -0.56
CLIP4-204ENST00000404424 MXRA8Q9BRK3 442 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 TAOK3Q9H2K8 898 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 EPB41L4BQ9H329 900 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 TMOD4Q9NZQ9 345 aa11.58□□□□□ -0.56
CLIP4-204ENST00000404424 TRPC5Q9UL62 973 aaPredicted RBP11.58□□□□□ -0.56
CLIP4-204ENST00000404424 MYH11P35749 1972 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 SLX4Q8IY92 1834 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 GOLGA6L7A0A1B0GV03 622 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 CAND2O75155 1236 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 MCCD1P59942 119 aaPredicted RBP11.57□□□□□ -0.56
CLIP4-204ENST00000404424 UBXN2AP68543 259 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 ADCY2Q08462 1091 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 C6orf118Q5T5N4 469 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 ZDHHC24Q6UX98 284 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 ADAT2Q7Z6V5 191 aaKnown RBP11.57□□□□□ -0.56
CLIP4-204ENST00000404424 RPUSD2Q8IZ73 545 aaKnown RBP11.57□□□□□ -0.56
CLIP4-204ENST00000404424 XXYLT1Q8NBI6 393 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 BANK1Q8NDB2 785 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 FBXO25Q8TCJ0 367 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 SLC20A1Q8WUM9 679 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 TMEM109Q9BVC6 243 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 DBR1Q9UK59 544 aaKnown RBP11.57□□□□□ -0.56
CLIP4-204ENST00000404424 SNX24Q9Y343 169 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 DCDC2CA8MYV0 355 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 MMP13P45452 471 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 PEX5P50542 639 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 MNAT1P51948 309 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 PPP3CAQ08209 521 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 SLMAPQ14BN4 828 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 TNIP1Q15025 636 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 CYP1B1Q16678 543 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 MEX3CQ5U5Q3 659 aaKnown RBP11.57□□□□□ -0.56
CLIP4-204ENST00000404424 MIER3Q7Z3K6 550 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 CPLX4Q7Z7G2 160 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 ARHGEF19Q8IW93 802 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 CCDC13Q8IYE1 715 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 PRELID2Q8N945 189 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 CHMP6Q96FZ7 201 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 XPO6Q96QU8 1125 aaKnown RBP11.57□□□□□ -0.56
CLIP4-204ENST00000404424 IWS1Q96ST2 819 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 TIPINQ9BVW5 301 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 ST6GALNAC4Q9H4F1 302 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 GRHL1Q9NZI5 618 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 TMOD2Q9NZR1 351 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 MTUS1Q9ULD2 1270 aa11.57□□□□□ -0.56
CLIP4-204ENST00000404424 SCN9AQ15858 1988 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 SMCHD1A6NHR9 2005 aa11.56□□□□□ -0.56
CLIP4-204ENST00000404424 ZNF646O15015 1829 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms