RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 CTSSP25774 331 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 GPR15P49685 360 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 NEK3P51956 506 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 USP14P54578 494 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 NRG3P56975 720 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 U2AF1Q01081 240 aaKnown RBP eCLIP4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 TOP3AQ13472 1001 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 UBE3CQ15386 1083 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 ANO4Q32M45 955 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 PGS1Q32NB8 556 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 COBLL1Q53SF7 1204 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 CCSAPQ6IQ19 270 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 CNKSR3Q6P9H4 555 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 CXXC5Q7LFL8 322 aaKnown RBP4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 RHOT1Q8IXI2 618 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 PRR18Q8N4B5 295 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 KRTAP9-9Q9BYP9 154 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 KRTAP9-4Q9BYQ2 154 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 L2HGDHQ9H9P8 463 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 TLR9Q9NR96 1032 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 ING3Q9NXR8 418 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 FAM184BQ9ULE4 1060 aa4.99□□□□□ -1.61
HMGB1P17-201ENST00000403495 WNT10BO00744 389 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 MAFGO15525 162 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 NRP2O60462 931 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 MYL3P08590 195 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 SYN1P17600 705 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 POLD1P28340 1107 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 SLC6A9P48067 706 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 DSC2Q02487 901 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 MESP2Q0VG99 397 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 UBE4AQ14139 1066 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 PCOLCEQ15113 449 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 VWA3BQ502W6 1294 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 MCTP2Q6DN12 878 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 ATG14Q6ZNE5 492 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 Q6ZVL8 140 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 RTKN2Q8IZC4 609 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 MARCH10Q8NA82 808 aaPredicted RBP4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 PPP1R14CQ8TAE6 165 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 WRNIP1Q96S55 665 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 MPHOSPH6Q99547 160 aaKnown RBP4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 CGRRF1Q99675 332 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 KRTAP4-12Q9BQ66 201 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 LRFN3Q9BTN0 628 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 PCDH18Q9HCL0 1135 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 C1orf112Q9NSG2 853 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 RBM12Q9NTZ6 932 aaKnown RBP4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 PCDHB1Q9Y5F3 818 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 PCDHGB6Q9Y5F9 930 aa4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 RBM8AQ9Y5S9 174 aaKnown RBP4.98□□□□□ -1.61
HMGB1P17-201ENST00000403495 ARID4BQ4LE39 1312 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 C2orf78A6NCI8 922 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 TPP1O14773 563 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 MAFO75444 373 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 UBXN7O94888 489 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 KRT1P04264 644 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 LTA4HP09960 611 aaKnown RBP4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 C1QTNF9P0C862 333 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 RPL13P26373 211 aaKnown RBP4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 MRE11P49959 708 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 MAP2K6P52564 334 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 MGAT2Q10469 447 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 EIF4HQ15056 248 aaKnown RBP4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 CCDC178Q5BJE1 867 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 CYB5RLQ6IPT4 315 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 DENND1CQ8IV53 801 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 FAM156AQ8NDB6 213 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 REPS2Q8NFH8 660 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 GPR156Q8NFN8 814 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 PARD3BQ8TEW8 1205 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 HOXB13Q92826 284 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 HDAC10Q969S8 669 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 NT5C1BQ96P26 610 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 UIMC1Q96RL1 719 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 POLR3GLQ9BT43 218 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 SARGQ9BW04 601 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 APOL5Q9BWW9 433 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 B3GNT5Q9BYG0 378 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 ARMT1Q9H993 441 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 CNOT6Q9ULM6 557 aaKnown RBP4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 SIK3Q9Y2K2 1263 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 ZDHHC9Q9Y397 364 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 KCTD3Q9Y597 815 aa4.97□□□□□ -1.61
HMGB1P17-201ENST00000403495 FFAR3O14843 346 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 B3GALT2O43825 422 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 PLIN1O60240 522 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 DTNBO60941 627 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 FTLP02792 175 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 CYP1A1P04798 512 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 TRIM27P14373 513 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 HTR1BP28222 390 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 ETV4P43268 484 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 TARDBPQ13148 414 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 TBR1Q16650 682 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 TRIM68Q6AZZ1 485 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 SWSAP1Q6NVH7 229 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 KLHDC10Q6PID8 442 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 Q6ZUG5 572 aa4.96□□□□□ -1.62
HMGB1P17-201ENST00000403495 CCDC149Q6ZUS6 474 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms