RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 DNAJB4Q9UDY4 337 aa13.81□□□□□ -0.2
PRAME-204ENST00000403441 LIMD1Q9UGP4 676 aa13.81□□□□□ -0.2
PRAME-204ENST00000403441 PCDHB2Q9Y5E7 798 aa13.81□□□□□ -0.2
PRAME-204ENST00000403441 OFD1O75665 1012 aa13.8□□□□□ -0.2
PRAME-204ENST00000403441 CDKL5O76039 1030 aa13.8□□□□□ -0.2
PRAME-204ENST00000403441 FDPSP14324 419 aaKnown RBP13.8□□□□□ -0.2
PRAME-204ENST00000403441 QARSP47897 775 aaKnown RBP13.8□□□□□ -0.2
PRAME-204ENST00000403441 SLC11A1P49279 550 aa13.8□□□□□ -0.2
PRAME-204ENST00000403441 PLA2G4FQ68DD2 849 aa13.8□□□□□ -0.2
PRAME-204ENST00000403441 ASTLQ6HA08 431 aaPredicted RBP13.8□□□□□ -0.2
PRAME-204ENST00000403441 CCDC149Q6ZUS6 474 aa13.8□□□□□ -0.2
PRAME-204ENST00000403441 OTOP3Q7RTS5 596 aa13.8□□□□□ -0.2
PRAME-204ENST00000403441 KRT25Q7Z3Z0 450 aa13.8□□□□□ -0.2
PRAME-204ENST00000403441 KSR1Q8IVT5 923 aa13.8□□□□□ -0.2
PRAME-204ENST00000403441 PSPC1Q8WXF1 523 aaKnown RBP13.8□□□□□ -0.2
PRAME-204ENST00000403441 MBOAT7Q96N66 472 aa13.8□□□□□ -0.2
PRAME-204ENST00000403441 FAM193BQ96PV7 902 aaPredicted RBP13.8□□□□□ -0.2
PRAME-204ENST00000403441 KANSL3Q9P2N6 904 aa13.8□□□□□ -0.2
PRAME-204ENST00000403441 PPME1Q9Y570 386 aa13.8□□□□□ -0.2
PRAME-204ENST00000403441 COL4A3BPQ9Y5P4 624 aa13.8□□□□□ -0.2
PRAME-204ENST00000403441 CFAP54Q96N23 3096 aa13.8□□□□□ -0.2
PRAME-204ENST00000403441 CNTNAP2Q9UHC6 1331 aa13.8□□□□□ -0.2
PRAME-204ENST00000403441 MEIS3P2A8K0S8 358 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 SSBP05455 408 aaKnown RBP eCLIP13.79□□□□□ -0.2
PRAME-204ENST00000403441 KLRC2P26717 231 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 RFC5P40937 340 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 PPP2R5CQ13362 524 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 INF2Q27J81 1249 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 LETM2Q2VYF4 491 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 KANK3Q6NY19 840 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 ELMSAN1Q6PJG2 1045 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 SRGAP1Q7Z6B7 1085 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 TMEM105Q8N8V8 129 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 CEP170P1Q96L14 293 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 FAM20AQ96MK3 541 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 AIFM3Q96NN9 605 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 SMOC2Q9H3U7 446 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 RSAD1Q9HA92 442 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 IFT122Q9HBG6 1241 aa13.79□□□□□ -0.2
PRAME-204ENST00000403441 MRPL17Q9NRX2 175 aaKnown RBP13.79□□□□□ -0.2
PRAME-204ENST00000403441 DENND4AQ7Z401 1863 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 CCDC194A0A1B0GVG4 234 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 PROB1E7EW31 1015 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 SLC37A4O43826 429 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 GAS2O43903 313 aaKnown RBP13.78□□□□□ -0.2
PRAME-204ENST00000403441 ERLIN2O94905 339 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 URODP06132 367 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 SRGAP2CP0DJJ0 459 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 GCFC2P16383 781 aaKnown RBP13.78□□□□□ -0.2
PRAME-204ENST00000403441 CLCN4P51793 760 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 CLCN5P51795 746 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 NPEPPSP55786 919 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 AGMOQ6ZNB7 445 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 GPR149Q86SP6 731 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 ZNF280BQ86YH2 543 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 NSUN7Q8NE18 718 aaKnown RBP13.78□□□□□ -0.2
PRAME-204ENST00000403441 TCP11Q8WWU5 503 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 PRPF31Q8WWY3 499 aaKnown RBP13.78□□□□□ -0.2
PRAME-204ENST00000403441 SNX27Q96L92 541 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 TMEM175Q9BSA9 504 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 PHF20Q9BVI0 1012 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 VN1R3Q9BXE9 311 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 VAV3Q9UKW4 847 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 FAN1Q9Y2M0 1017 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 MYO10Q9HD67 2058 aa13.78□□□□□ -0.2
PRAME-204ENST00000403441 EML1O00423 815 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 MARCH6O60337 910 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 B4GALT3O60512 393 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 ALDH2P05091 517 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 P4HBP07237 508 aaKnown RBP13.77□□□□□ -0.21
PRAME-204ENST00000403441 CNPP09543 421 aaKnown RBP13.77□□□□□ -0.21
PRAME-204ENST00000403441 XBP1P17861 261 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 LAMTOR4Q0VGL1 99 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 TDGQ13569 410 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 C15orf39Q6ZRI6 1047 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 MRPL10Q7Z7H8 261 aaKnown RBP13.77□□□□□ -0.21
PRAME-204ENST00000403441 NEK8Q86SG6 692 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 NECAB1Q8N987 351 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 CNNM3Q8NE01 707 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 FLCNQ8NFG4 579 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 TMEM143Q96AN5 459 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 KLHL5Q96PQ7 755 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 NAP1L4Q99733 375 aaKnown RBP13.77□□□□□ -0.21
PRAME-204ENST00000403441 DHX33Q9H6R0 707 aaKnown RBP13.77□□□□□ -0.21
PRAME-204ENST00000403441 UBN1Q9NPG3 1134 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 DPP7Q9UHL4 492 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 FBXL21Q9UKT6 434 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 LIMCH1Q9UPQ0 1083 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 SSX2IPQ9Y2D8 614 aa13.77□□□□□ -0.21
PRAME-204ENST00000403441 ASAP2O43150 1006 aa13.76□□□□□ -0.21
PRAME-204ENST00000403441 DDHD2O94830 711 aa13.76□□□□□ -0.21
PRAME-204ENST00000403441 POMCP01189 267 aa13.76□□□□□ -0.21
PRAME-204ENST00000403441 ADH1AP07327 375 aa13.76□□□□□ -0.21
PRAME-204ENST00000403441 NCLP19338 710 aaKnown RBP13.76□□□□□ -0.21
PRAME-204ENST00000403441 NBL1P41271 181 aa13.76□□□□□ -0.21
PRAME-204ENST00000403441 EMC2Q15006 297 aa13.76□□□□□ -0.21
PRAME-204ENST00000403441 PCBP1Q15365 356 aaKnown RBP eCLIP13.76□□□□□ -0.21
PRAME-204ENST00000403441 PPP4R3AQ6IN85 833 aa13.76□□□□□ -0.21
PRAME-204ENST00000403441 OTUD6AQ7L8S5 288 aa13.76□□□□□ -0.21
PRAME-204ENST00000403441 RNF149Q8NC42 400 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms