RNA–Protein interactions for RNA: ENST00000399668.6

KNL1-202, Transcript of kinetochore scaffold 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KNL1, Length 7,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-202ENST00000399668 PDZD8Q8NEN9 1154 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 FAF2Q96CS3 445 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 SPATA33Q96N06 139 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 JPH1Q9HDC5 661 aaPredicted RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 FAM114A2Q9NRY5 505 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 CEP72Q9P209 647 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 AMACRQ9UHK6 382 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 HERC5Q9UII4 1024 aaKnown RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 TECPR2O15040 1411 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 ESYT3A0FGR9 886 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 TYW5A2RUC4 315 aaKnown RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 EIF3CLB5ME19 914 aaKnown RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 RASA4BC9J798 803 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 RASA4O43374 803 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 BNIP3LO60238 219 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 ATP1A1P05023 1023 aaKnown RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 APRTP07741 180 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 MX2P20592 715 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 ARL4AP40617 200 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 AP1B1Q10567 949 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 ART3Q13508 389 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 RSPH3Q86UC2 560 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 SCN4BQ8IWT1 228 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 MCPH1Q8NEM0 835 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 ATXN7L3BQ96GX2 97 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 PPP1R36Q96LQ0 422 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 EIF3CQ99613 913 aaKnown RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 ELAC2Q9BQ52 826 aaKnown RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 TRIM56Q9BRZ2 755 aaKnown RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 TMEM39BQ9GZU3 492 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 SMYD3Q9H7B4 428 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 RRP15Q9Y3B9 282 aaKnown RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 ZNF142P52746 1687 aaPredicted RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 KDM3BQ7LBC6 1761 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 ESYT2A0FGR8 921 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 RASGRF2O14827 1237 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 MYL3P08590 195 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 NMT1P30419 496 aaKnown RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 MTM1Q13496 603 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 NR1I3Q14994 352 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 PDIA6Q15084 440 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 DBN1Q16643 649 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 OR6B2Q6IFH4 312 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 DSTYKQ6XUX3 929 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 CLEC17AQ6ZS10 378 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 CENPUQ71F23 418 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 APOBEC3FQ8IUX4 373 aaKnown RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 SRRM1Q8IYB3 904 aaKnown RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 MIPOL1Q8TD10 442 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 MMP19Q99542 508 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 MRPL4Q9BYD3 311 aaKnown RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 TRIM9Q9C026 710 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 OSBPL5Q9H0X9 879 aaPredicted RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 ABCF3Q9NUQ8 709 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 KLHL11Q9NVR0 708 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 SEL1LQ9UBV2 794 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 SLC12A6Q9UHW9 1150 aa3.48□□□□□ -1.85
KNL1-202ENST00000399668 CNOT7Q9UIV1 285 aaKnown RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 TSR3Q9UJK0 312 aaKnown RBP3.48□□□□□ -1.85
KNL1-202ENST00000399668 ADGRB1O14514 1584 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CD163L1Q9NR16 1453 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 AP3B2Q13367 1082 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CUL1Q13616 776 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SLMAPQ14BN4 828 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 IQCB1Q15051 598 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SNCBQ16143 134 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 C1orf228Q6PIY5 440 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CATSPER4Q7RTX7 472 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 BBOF1Q8ND07 529 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 SPATA4Q8NEY3 305 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 TBC1D16Q8TBP0 767 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 PSPC1Q8WXF1 523 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 DPF2Q92785 391 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 RNF25Q96BH1 459 aaPredicted RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 RNF146Q9NTX7 359 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CPSF2Q9P2I0 782 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 AGO2Q9UKV8 859 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 CAPN11Q9UMQ6 739 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 NOC2LQ9Y3T9 749 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 ARFGEF1Q9Y6D6 1849 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 UBE4BO95155 1302 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 YLPM1P49750 1951 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 ZNF407Q9C0G0 2248 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 MYMKA6NI61 221 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 hCG_1984214I3L0E3 225 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 MT-ND3P03897 115 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CA4P22748 312 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 RWDD2BP57060 319 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 PDCLQ13371 301 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 ALCAMQ13740 583 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 BBS9Q3SYG4 887 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CEP55Q53EZ4 464 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 ZC2HC1CQ53FD0 456 aaPredicted RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 ZNF667Q5HYK9 610 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 HABP4Q5JVS0 413 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 CCDC137Q6PK04 289 aaKnown RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 ZNF713Q8N859 430 aaPredicted RBP3.47□□□□□ -1.85
KNL1-202ENST00000399668 AFG1LQ8WV93 481 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 CPA5Q8WXQ8 436 aa3.47□□□□□ -1.85
KNL1-202ENST00000399668 TTC17Q96AE7 1141 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms