RNA–Protein interactions for RNA: ENST00000399638.5

CACNA1C-216, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,595 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-216ENST00000399638 TOM1L1O75674 476 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 SKIP12755 728 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 DPEP1P16444 411 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 PSMC1P62191 440 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 MTX1Q13505 466 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 PKP1Q13835 747 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 UNC45BQ8IWX7 931 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 SPACA7Q96KW9 195 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 EHD2Q9NZN4 543 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 TARBP1Q13395 1621 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 M0QYV0 167 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 TCF3P15923 654 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 WEE1P30291 646 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 NOL9Q5SY16 702 aaKnown RBP11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 PLEKHM3Q6ZWE6 761 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 CYFIP1Q7L576 1253 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 MAGEB5Q9BZ81 275 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 STK17AQ9UEE5 414 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 ZMYM6O95789 1325 aa11.66□□□□□ -0.54
CACNA1C-216ENST00000399638 KLHL18O94889 574 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 SEPT2Q15019 361 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 AARS2Q5JTZ9 985 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 RPAINQ86UA6 219 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 RASEFQ8IZ41 740 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 APPL2Q8NEU8 664 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 IQCDQ96DY2 449 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 PPP1R13BQ96KQ4 1090 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 CCDC151A5D8V7 595 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 TTI1O43156 1089 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 SART1O43290 800 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 PODNQ7Z5L7 613 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 PATL1Q86TB9 770 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 CCHCR1Q8TD31 782 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 ANKRD49Q8WVL7 239 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 PAWRQ96IZ0 340 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 TRPV6Q9H1D0 765 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 DYTNA2CJ06 578 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 VPS39Q96JC1 886 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 CABS1Q96KC9 395 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 GSDMAQ96QA5 445 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 MRPL47Q9HD33 250 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 MAN1A2O60476 641 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 RPN1P04843 607 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 VEGFAP15692 232 aaPredicted RBP11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 DDX5P17844 614 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 IFNAR2P48551 515 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 MTMR3Q13615 1198 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 SMAD1Q15797 465 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 ANKRD13CQ8N6S4 541 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 RNF208Q9H0X6 261 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 UNC45AQ9H3U1 944 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 DDX28Q9NUL7 540 aaKnown RBP11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 PCDHA5Q9Y5H7 936 aa11.65□□□□□ -0.54
CACNA1C-216ENST00000399638 PNMA6FA0A0J9YX94 578 aa11.65□□□□□ -0.55
CACNA1C-216ENST00000399638 TOGARAM2Q6ZUX3 1019 aa11.65□□□□□ -0.55
CACNA1C-216ENST00000399638 TMC7Q7Z402 723 aa11.65□□□□□ -0.55
CACNA1C-216ENST00000399638 LARP4BQ92615 738 aaKnown RBP11.65□□□□□ -0.55
CACNA1C-216ENST00000399638 ZNF560Q96MR9 790 aa11.65□□□□□ -0.55
CACNA1C-216ENST00000399638 KIF2CQ99661 725 aa11.65□□□□□ -0.55
CACNA1C-216ENST00000399638 POLR3FQ9H1D9 316 aaPredicted RBP11.65□□□□□ -0.55
CACNA1C-216ENST00000399638 PCDHA6Q9UN73 950 aa11.65□□□□□ -0.55
CACNA1C-216ENST00000399638 PCDHA8Q9Y5H6 950 aa11.65□□□□□ -0.55
CACNA1C-216ENST00000399638 PREX2Q70Z35 1606 aa11.65□□□□□ -0.55
CACNA1C-216ENST00000399638 LRRD1A4D1F6 860 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 AFPP02771 609 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 URODP06132 367 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 KRT7P08729 469 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 DARSP14868 501 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 CCDC90BQ9GZT6 254 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 CAPN1P07384 714 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 SLC9A1P19634 815 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 MRPL28Q13084 256 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 HIPK4Q8NE63 616 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 GIPC2Q8TF65 315 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 GTF3C2Q8WUA4 911 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 DYDC2Q96IM9 177 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 MRPL4Q9BYD3 311 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 STX18Q9P2W9 335 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 P4HA2O15460 535 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 PCP11498 1178 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 PASD1Q8IV76 773 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 MB21D1Q8N884 522 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 SSH3Q8TE77 659 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 PIGOQ8TEQ8 1089 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 THG1LQ9NWX6 298 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 ATP7AQ04656 1500 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 PRR23D1E9PI22 279 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 PRR23D2P0DMB1 279 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 KLRC2P26717 231 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 ERAP2Q6P179 960 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 KCNV1Q6PIU1 500 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 ZSCAN18Q8TBC5 510 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 COLEC11Q9BWP8 271 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 PAPOLBQ9NRJ5 636 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 DBNLQ9UJU6 430 aaKnown RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 ITIH6Q6UXX5 1313 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 E9PMD0 336 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 LZTS3O60299 673 aaPredicted RBP11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 KRT71Q3SY84 523 aa11.64□□□□□ -0.55
CACNA1C-216ENST00000399638 BRINP3Q76B58 766 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms