RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 ULK4Q96C45 1275 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 EGFL8Q99944 293 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 RPAP3Q9H6T3 665 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 STAP2Q9UGK3 403 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 TRIM17Q9Y577 477 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 MYO1DO94832 1006 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 PDE8BO95263 885 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 ADORA2BP29275 332 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 EIF3BP55884 814 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 RWDD2BP57060 319 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 FKBP3Q00688 224 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 SCARF1Q14162 830 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 CTTNQ14247 550 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 SMYD4Q8IYR2 804 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 EFHBQ8N7U6 833 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 TRIM33Q9UPN9 1127 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 PCDHB9Q9Y5E1 797 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 SEC31AO94979 1220 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 DDX5P17844 614 aaKnown RBP11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 CXCR5P32302 372 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 GPC3P51654 580 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 SEMA3FQ13275 785 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 MAPK6Q16659 721 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 MGAT5BQ3V5L5 792 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 SH3BP5LQ7L8J4 393 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 NEK9Q8TD19 979 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 ACAP3Q96P50 834 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 ACTR5Q9H9F9 607 aaPredicted RBP11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 ATP6V0A4Q9HBG4 840 aa11.74□□□□□ -0.53
CACNA1C-215ENST00000399637 COPEO14579 308 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 DCTN3O75935 186 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 MAPK9P45984 424 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 CCDC15Q0P6D6 951 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 EIF2B5Q13144 721 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 NNTQ13423 1086 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 PPP4R3CPQ6ZMV5 832 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 CEP68Q76N32 757 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 PDIK1LQ8N165 341 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 GLT1D1Q96MS3 346 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 GAS2L1Q99501 681 aaPredicted RBP11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 ABCB11O95342 1321 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 TTLL13PA6NNM8 815 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 ZNF263O14978 683 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 COPS2P61201 443 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 ZNF667Q5HYK9 610 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 FOXP4Q8IVH2 680 aaPredicted RBP11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 MYCBPQ99417 103 aaPredicted RBP11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 SNX5Q9Y5X3 404 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 ZFYVE16Q7Z3T8 1539 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 PNMA6FA0A0J9YX94 578 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 PRAMEF22A3QJZ6 481 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 CCDC151A5D8V7 595 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 RAG1P15918 1043 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 EIF4A3P38919 411 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 ALDH7A1P49419 539 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 MDM2Q00987 491 aaPredicted RBP11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 TERF2Q15554 542 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 ARHGEF25Q86VW2 580 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 DYNLL2Q96FJ2 89 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 CASS4Q9NQ75 786 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 NOVA2Q9UNW9 492 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 HMGCS2P54868 508 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 ARL4CP56559 192 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 SLC39A14Q15043 492 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 GRAMD1BQ3KR37 738 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 TEDDM1Q5T9Z0 273 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 ANGEL2Q5VTE6 544 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 PRAMEF18Q5VWM3 479 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 RGL4Q8IZJ4 473 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 SSH3Q8TE77 659 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 CALR3Q96L12 384 aaKnown RBP11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 AP1M1Q9BXS5 423 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 MUC3BQ9H195 1237 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 FAM96AQ9H5X1 160 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 GGA3Q9NZ52 723 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 IQGAP3Q86VI3 1631 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 E9PMD0 336 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 ORC4O43929 436 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 MMP1P03956 469 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 E2F5Q15329 346 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 ALS2CLQ60I27 953 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 SYT2Q8N9I0 419 aaPredicted RBP11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 OR9Q1Q8NGQ5 310 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 NFKBIZQ9BYH8 718 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 ASPSCR1Q9BZE9 553 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 SAYSD1Q9NPB0 183 aa11.73□□□□□ -0.53
CACNA1C-215ENST00000399637 UNC13BO14795 1591 aa11.72□□□□□ -0.53
CACNA1C-215ENST00000399637 EEF2KMTQ96G04 330 aa11.72□□□□□ -0.53
CACNA1C-215ENST00000399637 ZNF512Q96ME7 567 aaPredicted RBP11.72□□□□□ -0.53
CACNA1C-215ENST00000399637 FMO2Q99518 471 aa11.72□□□□□ -0.53
CACNA1C-215ENST00000399637 TRIM8Q9BZR9 551 aa11.72□□□□□ -0.53
CACNA1C-215ENST00000399637 TMEM39AQ9NV64 488 aa11.72□□□□□ -0.53
CACNA1C-215ENST00000399637 APOBEC2Q9Y235 224 aaKnown RBP11.72□□□□□ -0.53
CACNA1C-215ENST00000399637 FAM196BA6NMK8 535 aa11.72□□□□□ -0.53
CACNA1C-215ENST00000399637 ARHGEF9O43307 516 aa11.72□□□□□ -0.53
CACNA1C-215ENST00000399637 TMEM62Q0P6H9 643 aa11.72□□□□□ -0.53
CACNA1C-215ENST00000399637 LLGL1Q15334 1064 aa11.72□□□□□ -0.53
CACNA1C-215ENST00000399637 ZMYM1Q5SVZ6 1142 aa11.72□□□□□ -0.53
CACNA1C-215ENST00000399637 TMEM179Q6ZVK1 233 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms