RNA–Protein interactions for RNA: ENST00000399516.7

LAMA3-203, Transcript of laminin subunit alpha 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA3, Length 9,834 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA3-203ENST00000399516 LDHAP00338 332 aaKnown RBP11.95□□□□□ -0.5
LAMA3-203ENST00000399516 CUL3Q13618 768 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 PEX3P56589 373 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 CCNA1P78396 465 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 IRX1P78414 480 aaPredicted RBP11.95□□□□□ -0.5
LAMA3-203ENST00000399516 C1orf54Q8WWF1 131 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 TEX12Q9BXU0 123 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 TRIM66O15016 1216 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 KRT4P19013 534 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 HIF1AQ16665 826 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 TXNRD1Q16881 649 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 TEX9Q8N6V9 391 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 E9PMD0 336 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 M0QYV0 167 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 CC2D2BQ6DHV5 1058 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 SHC4Q6S5L8 630 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 KRT27Q7Z3Y8 459 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 LONP2Q86WA8 852 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 RNF139Q8WU17 664 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 EDEM3Q9BZQ6 932 aa11.95□□□□□ -0.5
LAMA3-203ENST00000399516 DAB2P98082 770 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 LRRC8EQ6NSJ5 796 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 CATSPER3Q86XQ3 398 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 SNX19Q92543 992 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 BSDC1Q9NW68 430 aaPredicted RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 ASAP1Q9ULH1 1129 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 ARHGEF37A1IGU5 675 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 SLC16A3O15427 465 aaKnown RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 BRD2P25440 801 aaKnown RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 RNF25Q96BH1 459 aaPredicted RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 NAF1Q96HR8 494 aaKnown RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 PITPNM2Q9BZ72 1349 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 ERVV-1B6SEH8 477 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 F5H423 210 aaPredicted RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 NMT2O60551 498 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 HNRNPCP07910 306 aaKnown RBP eCLIP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 KRT7P08729 469 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 KCNA3P22001 575 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 FOXD4Q12950 439 aaPredicted RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 E4F1Q66K89 784 aaPredicted RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 CDKL3Q8IVW4 592 aaPredicted RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 EHD2Q9NZN4 543 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 TSPOAP1O95153 1857 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 POTEFA5A3E0 1075 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 ZNF185O15231 689 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 POTEIP0CG38 1075 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 SRGAP2CP0DJJ0 459 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 POTEGQ6S5H5 508 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 POTEEQ6S8J3 1075 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 AGGF1Q8N302 714 aaeCLIP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 CCDC90BQ9GZT6 254 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 FTLP02792 175 aaPredicted RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 RBBP7Q16576 425 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 DPP9Q86TI2 863 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 GLYCTKQ8IVS8 523 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 FOXN1O15353 648 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 SNAP25P60880 206 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 MAPRE2Q15555 327 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 NAALADL2Q58DX5 795 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 HEATR6Q6AI08 1181 aaKnown RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 RFX8Q6ZV50 586 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 RHOT1Q8IXI2 618 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 EIF2AK2P19525 551 aaKnown RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 SERPINB4P48594 390 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 FAM160B2Q86V87 743 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 SH2D3CQ8N5H7 860 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 OR9Q1Q8NGQ5 310 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 PI4KBQ9UBF8 816 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 LIMA1Q9UHB6 759 aaKnown RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 SMG5Q9UPR3 1016 aaKnown RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 ZNF711Q9Y462 761 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 USP15Q9Y4E8 981 aaPredicted RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 F8W8V4 182 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 ITPRIPL1Q6GPH6 555 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 PDXDC2PQ6P474 469 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 SH3RF3Q8TEJ3 882 aaPredicted RBP11.94□□□□□ -0.5
LAMA3-203ENST00000399516 KIAA1586Q9HCI6 787 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 SLC9A2Q9UBY0 812 aa11.94□□□□□ -0.5
LAMA3-203ENST00000399516 ENO1P06733 434 aaKnown RBP11.93□□□□□ -0.5
LAMA3-203ENST00000399516 ABI1Q8IZP0 508 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 K7ERI5 159 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 CDC27P30260 824 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 ARSEP51690 589 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 SEMA3FQ13275 785 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 SLC27A3Q5K4L6 730 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 SYDE1Q6ZW31 735 aaPredicted RBP11.93□□□□□ -0.5
LAMA3-203ENST00000399516 DCPSQ96C86 337 aaKnown RBP11.93□□□□□ -0.5
LAMA3-203ENST00000399516 CYP2D6P10635 497 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 FCER1AP12319 257 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 SDC4P31431 198 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 VAMP7P51809 220 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 KDSRQ06136 332 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 BYSLQ13895 437 aaKnown RBP11.93□□□□□ -0.5
LAMA3-203ENST00000399516 STAT4Q14765 748 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 PRPF38AQ8NAV1 312 aaKnown RBP11.93□□□□□ -0.5
LAMA3-203ENST00000399516 AMACRQ9UHK6 382 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 ZNF229Q9UJW7 825 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 MROH7-TTC4A0A0A0MT08 1334 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 CNKSR1Q969H4 720 aa11.93□□□□□ -0.5
LAMA3-203ENST00000399516 MADDQ8WXG6 1647 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms