RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 ATF4P18848 351 aaPredicted RBP10.19□□□□□ -0.78
SMAD9-203ENST00000399275 C21orf59P57076 290 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 NAA35Q5VZE5 725 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 ZBTB38Q8NAP3 1195 aaPredicted RBP10.19□□□□□ -0.78
SMAD9-203ENST00000399275 RSAD2Q8WXG1 361 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 MTERF3Q96E29 417 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 SEC16BQ96JE7 1060 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 PNKPQ96T60 521 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 CNPY3Q9BT09 278 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 SLITRK6Q9H5Y7 841 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 GALNT8Q9NY28 637 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 SPATA2Q9UM82 520 aa10.19□□□□□ -0.78
SMAD9-203ENST00000399275 APOBEC2Q9Y235 224 aaKnown RBP10.19□□□□□ -0.78
SMAD9-203ENST00000399275 ADGRB3O60242 1522 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 CCDC162PA2VCL2 907 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 TOM1L1O75674 476 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 HMGB2P26583 209 aaKnown RBP10.18□□□□□ -0.78
SMAD9-203ENST00000399275 DSG1Q02413 1049 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 TMEM63BQ5T3F8 832 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 MYCT1Q8N699 235 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 BBS2Q9BXC9 721 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 DDX18Q9NVP1 670 aaKnown RBP10.18□□□□□ -0.78
SMAD9-203ENST00000399275 ZSWIM5Q9P217 1185 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 RAB21Q9UL25 225 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 CEP152O94986 1710 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 NCAPD2Q15021 1401 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 ADORA1P30542 326 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 CLK1P49759 484 aaKnown RBP10.18□□□□□ -0.78
SMAD9-203ENST00000399275 AGBL2Q5U5Z8 902 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 NARS2Q96I59 477 aaKnown RBP10.18□□□□□ -0.78
SMAD9-203ENST00000399275 EDEM3Q9BZQ6 932 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 CD209Q9NNX6 404 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 WDR37Q9Y2I8 494 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 CBFA2T3O75081 653 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 CLPTM1O96005 669 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 MARK3P27448 753 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 NT5C2P49902 561 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 BFSP1Q12934 665 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 MKRN3Q13064 507 aaKnown RBP10.18□□□□□ -0.78
SMAD9-203ENST00000399275 RUNDC3AQ59EK9 446 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 KDM7AQ6ZMT4 941 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 MLXIPQ9HAP2 919 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 GPHNQ9NQX3 736 aaPredicted RBP10.18□□□□□ -0.78
SMAD9-203ENST00000399275 CDHR2Q9BYE9 1310 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 CRB1P82279 1406 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 A1BGP04217 495 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 GSNP06396 782 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 ATP4AP20648 1035 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 GARSP41250 739 aaKnown RBP10.18□□□□□ -0.78
SMAD9-203ENST00000399275 ARFIP2P53365 341 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 TMTC4Q5T4D3 741 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 TRPM8Q7Z2W7 1104 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 LRRC49Q8IUZ0 686 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 SLFN12Q8IYM2 578 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 CHCHD4Q8N4Q1 142 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 TGS1Q96RS0 853 aaKnown RBP10.18□□□□□ -0.78
SMAD9-203ENST00000399275 AP1M1Q9BXS5 423 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 COG4Q9H9E3 785 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 SH3GLB2Q9NR46 395 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 USTQ9Y2C2 406 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 GDAQ9Y2T3 454 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 PCDHB13Q9Y5F0 798 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 TULP4Q9NRJ4 1543 aa10.18□□□□□ -0.78
SMAD9-203ENST00000399275 LRRIQ4A6NIV6 560 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 IDH3BO43837 385 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 ORC4O43929 436 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 TNFRSF21O75509 655 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 HIBADHP31937 336 aaKnown RBP10.17□□□□□ -0.78
SMAD9-203ENST00000399275 PRCPP42785 496 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 FMR1Q06787 632 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMAD9-203ENST00000399275 PTPROQ16827 1216 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 C15orf59Q2T9L4 293 aaPredicted RBP10.17□□□□□ -0.78
SMAD9-203ENST00000399275 FAM47AQ5JRC9 791 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 CYP4F22Q6NT55 531 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 MICU2Q8IYU8 434 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 PNMA1Q8ND90 353 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 LBHD1Q9BQE6 289 aaPredicted RBP10.17□□□□□ -0.78
SMAD9-203ENST00000399275 GJB4Q9NTQ9 266 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 SAP30BPQ9UHR5 308 aaKnown RBP10.17□□□□□ -0.78
SMAD9-203ENST00000399275 HECW2Q9P2P5 1572 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 VIRMAQ69YN4 1812 aaKnown RBP10.17□□□□□ -0.78
SMAD9-203ENST00000399275 IGF2BP3O00425 579 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMAD9-203ENST00000399275 TTI1O43156 1089 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 PDHBP11177 359 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 PLS1Q14651 629 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 PPP4R3CPQ6ZMV5 832 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 PHF21AQ96BD5 680 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 KLC2Q9H0B6 622 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 BHMT2Q9H2M3 363 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 CCT8L1PA6NM43 557 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 CDC40O60508 579 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMAD9-203ENST00000399275 CCDC22O60826 627 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 GAS7O60861 476 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 RPS6KA5O75582 802 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 ALOX15P16050 662 aaPredicted RBP10.17□□□□□ -0.78
SMAD9-203ENST00000399275 PTGISQ16647 500 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 PROM2Q8N271 834 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 ACAP3Q96P50 834 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 ZNF446Q9NWS9 450 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 DCTN4Q9UJW0 460 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms