RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 TBX20Q9UMR3 447 aa15□□□□□ -0.01
PRAME-202ENST00000398743 BCS1LQ9Y276 419 aa15□□□□□ -0.01
PRAME-202ENST00000398743 CCDC188H7C350 402 aa14.99□□□□□ -0.01
PRAME-202ENST00000398743 PMM2O15305 246 aa14.99□□□□□ -0.01
PRAME-202ENST00000398743 PTPRAP18433 802 aa14.99□□□□□ -0.01
PRAME-202ENST00000398743 NPTX2P47972 431 aa14.99□□□□□ -0.01
PRAME-202ENST00000398743 HNRNPH2P55795 449 aaKnown RBP14.99□□□□□ -0.01
PRAME-202ENST00000398743 ZSCAN26Q16670 478 aa14.99□□□□□ -0.01
PRAME-202ENST00000398743 OTUD6AQ7L8S5 288 aa14.99□□□□□ -0.01
PRAME-202ENST00000398743 MAP4K3Q8IVH8 894 aa14.99□□□□□ -0.01
PRAME-202ENST00000398743 ZSWIM2Q8NEG5 633 aa14.99□□□□□ -0.01
PRAME-202ENST00000398743 REPS2Q8NFH8 660 aa14.99□□□□□ -0.01
PRAME-202ENST00000398743 PLEKHO2Q8TD55 490 aa14.99□□□□□ -0.01
PRAME-202ENST00000398743 CASKIN2Q8WXE0 1202 aa14.99□□□□□ -0.01
PRAME-202ENST00000398743 TMEM117Q9H0C3 514 aa14.99□□□□□ -0.01
PRAME-202ENST00000398743 THAP2Q9H0W7 228 aa14.99□□□□□ -0.01
PRAME-202ENST00000398743 ZNF112Q9UJU3 913 aa14.99□□□□□ -0.01
PRAME-202ENST00000398743 IGSF9BQ9UPX0 1349 aa14.99□□□□□ -0.01
PRAME-202ENST00000398743 DOCK1Q14185 1865 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 GOLGA6CA6NDK9 693 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 OPA1O60313 960 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 CLSTN1O94985 981 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 GOLGA6DP0CG33 693 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 PPATQ06203 517 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 SNRNP35Q16560 246 aaKnown RBP14.98□□□□□ -0.01
PRAME-202ENST00000398743 PALB2Q86YC2 1186 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 NSUN6Q8TEA1 469 aaKnown RBP14.98□□□□□ -0.01
PRAME-202ENST00000398743 KIFAP3Q92845 792 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 ATP6V0A1Q93050 837 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 C12orf42Q96LP6 360 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 SH3GL2Q99962 352 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 GOLGA6AQ9NYA3 693 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 TAS2R14Q9NYV8 317 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 GOLGA8KD6RF30 607 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 KRIT1O00522 736 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 DKC1O60832 514 aaKnown RBP eCLIP14.98□□□□□ -0.01
PRAME-202ENST00000398743 ADRB2P07550 413 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 ADSSP30520 456 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 DSG3P32926 999 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 HMGCS2P54868 508 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 RHOT2Q8IXI1 618 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 WHAMMQ8TF30 809 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.98□□□□□ -0.01
PRAME-202ENST00000398743 ARHGEF26Q96DR7 871 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 CEP170P1Q96L14 293 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 KIFC3Q9BVG8 833 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 AP1M1Q9BXS5 423 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 C17orf75Q9HAS0 396 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 KMT5AQ9NQR1 393 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 GABBR1Q9UBS5 961 aa14.98□□□□□ -0.01
PRAME-202ENST00000398743 PPP1R1BQ9UD71 204 aaPredicted RBP14.98□□□□□ -0.01
PRAME-202ENST00000398743 ZNF214Q9UL59 606 aaPredicted RBP14.98□□□□□ -0.01
PRAME-202ENST00000398743 DENND3A2RUS2 1198 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 GOLGA8IPA6NC78 632 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 GOLGA8JA6NMD2 632 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 CNGA1P29973 690 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 MCCD1P59942 119 aaPredicted RBP14.97□□□□□ -0.01
PRAME-202ENST00000398743 PPFIA1Q13136 1202 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 CBWD2Q8IUF1 395 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 EIF1ADQ8N9N8 165 aaKnown RBP14.97□□□□□ -0.01
PRAME-202ENST00000398743 FAM76AQ8TAV0 307 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 SLC20A1Q8WUM9 679 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 SPIRE2Q8WWL2 714 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 ISCUQ9H1K1 167 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 TAF1DQ9H5J8 278 aaPredicted RBP14.97□□□□□ -0.01
PRAME-202ENST00000398743 USP20Q9Y2K6 914 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 DIS3Q9Y2L1 958 aaKnown RBP14.97□□□□□ -0.01
PRAME-202ENST00000398743 ANKRD63C9JTQ0 380 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 FZD9O00144 591 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 SART1O43290 800 aaKnown RBP14.97□□□□□ -0.01
PRAME-202ENST00000398743 FAM153BP0C7A2 387 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 KCNA2P16389 499 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 FAM153CQ494X1 144 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 KRT39Q6A163 491 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 MREGQ8N565 214 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 SAAL1Q96ER3 474 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 CDHR1Q96JP9 859 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 NTPCRQ9BSD7 190 aaKnown RBP14.97□□□□□ -0.01
PRAME-202ENST00000398743 FAM153AQ9UHL3 310 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 TTC7AQ9ULT0 858 aaPredicted RBP14.97□□□□□ -0.01
PRAME-202ENST00000398743 ADAMTS5Q9UNA0 930 aa14.97□□□□□ -0.01
PRAME-202ENST00000398743 C19orf81C9J6K1 198 aa14.96□□□□□ -0.01
PRAME-202ENST00000398743 ZNF862O60290 1169 aa14.96□□□□□ -0.01
PRAME-202ENST00000398743 PSAPP07602 524 aa14.96□□□□□ -0.01
PRAME-202ENST00000398743 USP8P40818 1118 aa14.96□□□□□ -0.01
PRAME-202ENST00000398743 MAP2K1Q02750 393 aaPredicted RBP14.96□□□□□ -0.01
PRAME-202ENST00000398743 CUL1Q13616 776 aa14.96□□□□□ -0.01
PRAME-202ENST00000398743 TMEM132BQ14DG7 1078 aa14.96□□□□□ -0.01
PRAME-202ENST00000398743 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.96□□□□□ -0.01
PRAME-202ENST00000398743 APOBEC3FQ8IUX4 373 aaKnown RBP14.96□□□□□ -0.01
PRAME-202ENST00000398743 RPUSD2Q8IZ73 545 aaKnown RBP14.96□□□□□ -0.01
PRAME-202ENST00000398743 ZIM3Q96PE6 472 aa14.96□□□□□ -0.01
PRAME-202ENST00000398743 DDX47Q9H0S4 455 aaKnown RBP14.96□□□□□ -0.01
PRAME-202ENST00000398743 JPH1Q9HDC5 661 aaPredicted RBP14.96□□□□□ -0.01
PRAME-202ENST00000398743 LTBP3Q9NS15 1303 aa14.96□□□□□ -0.01
PRAME-202ENST00000398743 PARP14Q460N5 1801 aa14.96□□□□□ -0.02
PRAME-202ENST00000398743 DGAT1O75907 488 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 RGS20O76081 388 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 GUCY2FP51841 1108 aa14.95□□□□□ -0.02
PRAME-202ENST00000398743 MFAP3P55082 362 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms