RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 PCBP1Q15365 356 aaKnown RBP eCLIP14.92□□□□□ -0.02
VCX3A-202ENST00000398729 GLB1LQ6UWU2 654 aa14.92□□□□□ -0.02
VCX3A-202ENST00000398729 EFHBQ8N7U6 833 aa14.92□□□□□ -0.02
VCX3A-202ENST00000398729 SMRP1Q8NCR6 262 aa14.92□□□□□ -0.02
VCX3A-202ENST00000398729 ERMNQ8TAM6 284 aa14.92□□□□□ -0.02
VCX3A-202ENST00000398729 PIGOQ8TEQ8 1089 aa14.92□□□□□ -0.02
VCX3A-202ENST00000398729 MRPS27Q92552 414 aaKnown RBP14.92□□□□□ -0.02
VCX3A-202ENST00000398729 PGBD4Q96DM1 585 aa14.92□□□□□ -0.02
VCX3A-202ENST00000398729 LZTS1Q9Y250 596 aa14.92□□□□□ -0.02
VCX3A-202ENST00000398729 ERLIN2O94905 339 aa14.91□□□□□ -0.02
VCX3A-202ENST00000398729 GLP2RO95838 553 aa14.91□□□□□ -0.02
VCX3A-202ENST00000398729 SPATA31C1P0DKV0 1188 aa14.91□□□□□ -0.02
VCX3A-202ENST00000398729 NRIP1P48552 1158 aa14.91□□□□□ -0.02
VCX3A-202ENST00000398729 NDUFV1P49821 464 aa14.91□□□□□ -0.02
VCX3A-202ENST00000398729 POU5F1BQ06416 359 aa14.91□□□□□ -0.02
VCX3A-202ENST00000398729 RBM23Q86U06 439 aaKnown RBP14.91□□□□□ -0.02
VCX3A-202ENST00000398729 CATSPER3Q86XQ3 398 aa14.91□□□□□ -0.02
VCX3A-202ENST00000398729 LPPQ93052 612 aa14.91□□□□□ -0.02
VCX3A-202ENST00000398729 POLR3CQ9BUI4 534 aaPredicted RBP14.91□□□□□ -0.02
VCX3A-202ENST00000398729 TLE6Q9H808 572 aa14.91□□□□□ -0.02
VCX3A-202ENST00000398729 MINDY3Q9H8M7 445 aa14.91□□□□□ -0.02
VCX3A-202ENST00000398729 SPG21Q9NZD8 308 aa14.91□□□□□ -0.02
VCX3A-202ENST00000398729 PCDHB2Q9Y5E7 798 aa14.91□□□□□ -0.02
VCX3A-202ENST00000398729 PCDHGC5Q9Y5F6 944 aa14.91□□□□□ -0.02
VCX3A-202ENST00000398729 FSD2A1L4K1 749 aa14.9□□□□□ -0.02
VCX3A-202ENST00000398729 CARNS1A5YM72 827 aa14.9□□□□□ -0.02
VCX3A-202ENST00000398729 MED24O75448 989 aa14.9□□□□□ -0.02
VCX3A-202ENST00000398729 U2AF2P26368 475 aaKnown RBP eCLIP14.9□□□□□ -0.02
VCX3A-202ENST00000398729 AXLP30530 894 aa14.9□□□□□ -0.02
VCX3A-202ENST00000398729 ARL2P36404 184 aa14.9□□□□□ -0.02
VCX3A-202ENST00000398729 PBX3P40426 434 aa14.9□□□□□ -0.02
VCX3A-202ENST00000398729 ALDH7A1P49419 539 aaKnown RBP14.9□□□□□ -0.02
VCX3A-202ENST00000398729 PTENP60484 403 aa14.9□□□□□ -0.02
VCX3A-202ENST00000398729 ERVFC1P60507 584 aa14.9□□□□□ -0.02
VCX3A-202ENST00000398729 NCBP1Q09161 790 aaKnown RBP14.9□□□□□ -0.02
VCX3A-202ENST00000398729 LONRF3Q496Y0 759 aa14.9□□□□□ -0.02
VCX3A-202ENST00000398729 NACC1Q96RE7 527 aa14.9□□□□□ -0.02
VCX3A-202ENST00000398729 CDCA3Q99618 268 aaPredicted RBP14.9□□□□□ -0.02
VCX3A-202ENST00000398729 ENTPD7Q9NQZ7 604 aa14.9□□□□□ -0.02
VCX3A-202ENST00000398729 VPS13AQ96RL7 3174 aa14.9□□□□□ -0.02
VCX3A-202ENST00000398729 A0A087WWV3 80 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 INO80B-WBP1J3KQ70 363 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 FSCN2O14926 492 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 USO1O60763 962 aaKnown RBP14.89□□□□□ -0.03
VCX3A-202ENST00000398729 RPA1P27694 616 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 HOXA11P31270 313 aaPredicted RBP14.89□□□□□ -0.03
VCX3A-202ENST00000398729 MCM2P49736 904 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 PTPN5P54829 565 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 BCAR1P56945 870 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 RBM10P98175 930 aaKnown RBP14.89□□□□□ -0.03
VCX3A-202ENST00000398729 CAPSQ13938 189 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 NOMO2Q5JPE7 1267 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 HAUS3Q68CZ6 603 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 IFNLR1Q8IU57 520 aaPredicted RBP14.89□□□□□ -0.03
VCX3A-202ENST00000398729 SLC39A11Q8N1S5 342 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 CNNM3Q8NE01 707 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 MCPH1Q8NEM0 835 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 URGCPQ8TCY9 931 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 ASAP3Q8TDY4 903 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 TMX3Q96JJ7 454 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 TCF25Q9BQ70 676 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 POLR3FQ9H1D9 316 aaPredicted RBP14.89□□□□□ -0.03
VCX3A-202ENST00000398729 NGRNQ9NPE2 291 aaKnown RBP14.89□□□□□ -0.03
VCX3A-202ENST00000398729 DBR1Q9UK59 544 aaKnown RBP14.89□□□□□ -0.03
VCX3A-202ENST00000398729 BARX2Q9UMQ3 279 aaPredicted RBP14.89□□□□□ -0.03
VCX3A-202ENST00000398729 INPP5FQ9Y2H2 1132 aa14.89□□□□□ -0.03
VCX3A-202ENST00000398729 USP15Q9Y4E8 981 aaPredicted RBP14.89□□□□□ -0.03
VCX3A-202ENST00000398729 MEIS3P2A8K0S8 358 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 PER2O15055 1255 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 TSPAN1O60635 241 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 ZC3H11AO75152 810 aaKnown RBP eCLIP14.88□□□□□ -0.03
VCX3A-202ENST00000398729 OFD1O75665 1012 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 MUTP22033 750 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 GLRA2P23416 452 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 FXR2P51116 673 aaKnown RBP eCLIP14.88□□□□□ -0.03
VCX3A-202ENST00000398729 RNASELQ05823 741 aaKnown RBP14.88□□□□□ -0.03
VCX3A-202ENST00000398729 NBR1Q14596 966 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 DUSP6Q16828 381 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 PLPP4Q5VZY2 271 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 NOTUMQ6P988 496 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 POTEGQ6S5H5 508 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 MAEAQ7L5Y9 396 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 TMC7Q7Z402 723 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 MRPL10Q7Z7H8 261 aaKnown RBP14.88□□□□□ -0.03
VCX3A-202ENST00000398729 FBXL6Q8N531 539 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 VN1R2Q8NFZ6 395 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 CCDC51Q96ER9 411 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 ASIC4Q96FT7 647 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 TMEM169Q96HH4 297 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 NFKBIZQ9BYH8 718 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 RSAD1Q9HA92 442 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 TBC1D13Q9NVG8 400 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 CNTNAP2Q9UHC6 1331 aa14.88□□□□□ -0.03
VCX3A-202ENST00000398729 FAM186AA6NE01 2351 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 ARHGEF35A5YM69 484 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 NT5C1B-RDH14C9J2C7 533 aa14.87□□□□□ -0.03
VCX3A-202ENST00000398729 NCLP19338 710 aaKnown RBP14.87□□□□□ -0.03
VCX3A-202ENST00000398729 CCT6AP40227 531 aaKnown RBP14.87□□□□□ -0.03
VCX3A-202ENST00000398729 TOB1P50616 345 aaPredicted RBP14.87□□□□□ -0.03
VCX3A-202ENST00000398729 MBTD1Q05BQ5 628 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms