RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 PHF20Q9BVI0 1012 aa13.48□□□□□ -0.25
TFF3-202ENST00000398431 IRF2BPLQ9H1B7 796 aa13.48□□□□□ -0.25
TFF3-202ENST00000398431 DBR1Q9UK59 544 aaKnown RBP13.48□□□□□ -0.25
TFF3-202ENST00000398431 COL4A3BPQ9Y5P4 624 aa13.48□□□□□ -0.25
TFF3-202ENST00000398431 DENND4AQ7Z401 1863 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 CARNS1A5YM72 827 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 NRP1O14786 923 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 GFRA3O60609 400 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 DTNBO60941 627 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 ALDH2P05091 517 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 P4HBP07237 508 aaKnown RBP13.47□□□□□ -0.25
TFF3-202ENST00000398431 SRGAP2CP0DJJ0 459 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 CLCN4P51793 760 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 RNASELQ05823 741 aaKnown RBP13.47□□□□□ -0.25
TFF3-202ENST00000398431 LAMTOR4Q0VGL1 99 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 STK3Q13188 491 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 LETM2Q2VYF4 491 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 PPP4R3AQ6IN85 833 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 KRT25Q7Z3Z0 450 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 CABP7Q86V35 215 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 PPFIBP1Q86W92 1011 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 TDRD5Q8NAT2 981 aaKnown RBP13.47□□□□□ -0.25
TFF3-202ENST00000398431 SMG8Q8ND04 991 aaKnown RBP13.47□□□□□ -0.25
TFF3-202ENST00000398431 CEP170P1Q96L14 293 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 FAM20AQ96MK3 541 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 JPH2Q9BR39 696 aaPredicted RBP13.47□□□□□ -0.25
TFF3-202ENST00000398431 TMEM175Q9BSA9 504 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 TM6SF1Q9BZW5 370 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 RNF39Q9H2S5 420 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 RSAD1Q9HA92 442 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 GJB4Q9NTQ9 266 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 MIOSQ9NXC5 875 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 RGL1Q9NZL6 768 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 FAN1Q9Y2M0 1017 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 USP34Q70CQ2 3546 aa13.47□□□□□ -0.25
TFF3-202ENST00000398431 PTPRZ1P23471 2315 aaPredicted RBP13.46□□□□□ -0.25
TFF3-202ENST00000398431 C2orf16Q68DN1 1984 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 CPLX1O14810 134 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 EPB41L2O43491 1005 aaKnown RBP13.46□□□□□ -0.25
TFF3-202ENST00000398431 REC8O95072 547 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 POMCP01189 267 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 SSBP05455 408 aaKnown RBP eCLIP13.46□□□□□ -0.25
TFF3-202ENST00000398431 NPR3P17342 541 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 NCLP19338 710 aaKnown RBP13.46□□□□□ -0.25
TFF3-202ENST00000398431 KLRC2P26717 231 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 SPIRE1Q08AE8 756 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 EPHA7Q15375 998 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 EARS2Q5JPH6 523 aaKnown RBP13.46□□□□□ -0.25
TFF3-202ENST00000398431 ASTLQ6HA08 431 aaPredicted RBP13.46□□□□□ -0.25
TFF3-202ENST00000398431 FERMT3Q86UX7 667 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 C4orf19Q8IY42 314 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 RNF168Q8IYW5 571 aaPredicted RBP13.46□□□□□ -0.25
TFF3-202ENST00000398431 TMEM87AQ8NBN3 555 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 OXER1Q8TDS5 423 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 SFXN1Q9H9B4 322 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 MARCH5Q9NX47 278 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 KANSL3Q9P2N6 904 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 CYP46A1Q9Y6A2 500 aa13.46□□□□□ -0.25
TFF3-202ENST00000398431 INPPL1O15357 1258 aa13.45□□□□□ -0.26
TFF3-202ENST00000398431 ASAP2O43150 1006 aa13.45□□□□□ -0.26
TFF3-202ENST00000398431 PI15O43692 258 aa13.45□□□□□ -0.26
TFF3-202ENST00000398431 CLCN5P51795 746 aa13.45□□□□□ -0.26
TFF3-202ENST00000398431 SCRN1Q12765 414 aa13.45□□□□□ -0.26
TFF3-202ENST00000398431 KIAA0319Q5VV43 1072 aa13.45□□□□□ -0.26
TFF3-202ENST00000398431 ASCL5Q7RTU5 278 aa13.45□□□□□ -0.26
TFF3-202ENST00000398431 NEK8Q86SG6 692 aa13.45□□□□□ -0.26
TFF3-202ENST00000398431 COLGALT2Q8IYK4 626 aa13.45□□□□□ -0.26
TFF3-202ENST00000398431 URGCPQ8TCY9 931 aa13.45□□□□□ -0.26
TFF3-202ENST00000398431 PSPC1Q8WXF1 523 aaKnown RBP13.45□□□□□ -0.26
TFF3-202ENST00000398431 SLC7A3Q8WY07 619 aa13.45□□□□□ -0.26
TFF3-202ENST00000398431 EIF2AQ9BY44 585 aaKnown RBP13.45□□□□□ -0.26
TFF3-202ENST00000398431 SLKQ9H2G2 1235 aaPredicted RBP13.45□□□□□ -0.26
TFF3-202ENST00000398431 XPNPEP1Q9NQW7 623 aa13.45□□□□□ -0.26
TFF3-202ENST00000398431 BMP2KQ9NSY1 1161 aaPredicted RBP13.45□□□□□ -0.26
TFF3-202ENST00000398431 PPME1Q9Y570 386 aa13.45□□□□□ -0.26
TFF3-202ENST00000398431 CNTNAP2Q9UHC6 1331 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 TBX3O15119 743 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 DKC1O60832 514 aaKnown RBP eCLIP13.44□□□□□ -0.26
TFF3-202ENST00000398431 N4BP1O75113 896 aaKnown RBP13.44□□□□□ -0.26
TFF3-202ENST00000398431 SLITRK3O94933 977 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 SOD2P04179 222 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 YWHABP31946 246 aaKnown RBP13.44□□□□□ -0.26
TFF3-202ENST00000398431 RFC5P40937 340 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 NBL1P41271 181 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 PTENP60484 403 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 DSC1Q08554 894 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 CTTNQ14247 550 aaKnown RBP13.44□□□□□ -0.26
TFF3-202ENST00000398431 CWF19L1Q69YN2 538 aaKnown RBP13.44□□□□□ -0.26
TFF3-202ENST00000398431 C15orf39Q6ZRI6 1047 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 EXOC8Q8IYI6 725 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 RNF149Q8NC42 400 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 DYDC2Q96IM9 177 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 FAM193BQ96PV7 902 aaPredicted RBP13.44□□□□□ -0.26
TFF3-202ENST00000398431 RPS6KC1Q96S38 1066 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 LXNQ9BS40 222 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 EMILIN2Q9BXX0 1053 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 KCNK12Q9HB15 430 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 MRPL17Q9NRX2 175 aaKnown RBP13.44□□□□□ -0.26
TFF3-202ENST00000398431 IPPQ9Y573 584 aa13.44□□□□□ -0.26
TFF3-202ENST00000398431 CCDC194A0A1B0GVG4 234 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms