RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 DENND2CQ68D51 928 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 PASD1Q8IV76 773 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 CCDC13Q8IYE1 715 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 ZSWIM2Q8NEG5 633 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 DHX38Q92620 1227 aaKnown RBP5.3□□□□□ -1.56
SMAD4-202ENST00000398417 INPP4AQ96PE3 977 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-202ENST00000398417 PI4K2AQ9BTU6 479 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 SEPT9Q9UHD8 586 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-202ENST00000398417 GMNCA6NCL1 334 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 CLDN3O15551 220 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 GUCY2CP25092 1073 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 CUL1Q13616 776 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 ZKSCAN8Q15776 578 aaPredicted RBP5.3□□□□□ -1.56
SMAD4-202ENST00000398417 LONRF1Q17RB8 773 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 DACT2Q5SW24 774 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 XXYLT1Q8NBI6 393 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 ETNPPLQ8TBG4 499 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 SCFD2Q8WU76 684 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 IFT74Q96LB3 600 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 GABBR1Q9UBS5 961 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 DIS3Q9Y2L1 958 aaKnown RBP5.3□□□□□ -1.56
SMAD4-202ENST00000398417 IPO5O00410 1097 aaKnown RBP5.3□□□□□ -1.56
SMAD4-202ENST00000398417 KRT1P04264 644 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 HNRNPH1P31943 449 aaKnown RBP5.3□□□□□ -1.56
SMAD4-202ENST00000398417 TMED2Q15363 201 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 ZNF394Q53GI3 561 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 STRIP1Q5VSL9 837 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 PALB2Q86YC2 1186 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 NIM1KQ8IY84 436 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 TATDN2Q93075 761 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 NUP85Q9BW27 656 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 STK33Q9BYT3 514 aa5.3□□□□□ -1.56
SMAD4-202ENST00000398417 RGL2O15211 777 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 KRT19P08727 400 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 CD19P15391 556 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 CD58P19256 250 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 GBP2P32456 591 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 MOXD1Q6UVY6 613 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 RHOT2Q8IXI1 618 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 SNED1Q8TER0 1413 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 CPA5Q8WXQ8 436 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 P2RX7Q99572 595 aaKnown RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 AIPL1Q9NZN9 384 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 SUCLA2Q9P2R7 463 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 FZD1Q9UP38 647 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 CEP83Q9Y592 693 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 MYO3BQ8WXR4 1341 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 RBAK-RBAKDNI3L0D1 243 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 CTNND1O60716 968 aaKnown RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 NEBLO76041 1014 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 LCA5LO95447 670 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 CLK2P49760 499 aaKnown RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 SKOR1P84550 965 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 SLMAPQ14BN4 828 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 BRDTQ58F21 947 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 SIAH1Q8IUQ4 282 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 CCDC197Q8NCU1 140 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 RAPGEF5Q92565 580 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 CCT8L2Q96SF2 557 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 TMEM117Q9H0C3 514 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 STMN4Q9H169 189 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 TBK1Q9UHD2 729 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 COG5Q9UP83 839 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 STK38LQ9Y2H1 464 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 PCDHB4Q9Y5E5 795 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 IGSF9BQ9UPX0 1349 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 NFIBO00712 420 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 STX2P32856 288 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 SCARA5Q6ZMJ2 495 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 ZNF662Q6ZS27 426 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 ACSF2Q96CM8 615 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 TRIM11Q96F44 468 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 TMEM39BQ9GZU3 492 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 EPN3Q9H201 632 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 ANKRD26Q9UPS8 1709 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 IRS2Q9Y4H2 1338 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 ZNF233A6NK53 670 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 POC1B-GALNT4F8VUJ3 575 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 MEFVO15553 781 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 PLS3P13797 630 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 COILP38432 576 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 MTMR1Q13613 665 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 BAATQ14032 418 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 CEP55Q53EZ4 464 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 CYP4F22Q6NT55 531 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 EEPD1Q7L9B9 569 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 ZNF720Q7Z2F6 126 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 USP37Q86T82 979 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 FAM151AQ8WW52 585 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 C18orf8Q96DM3 657 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 TRPC6Q9Y210 931 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 SUGT1Q9Y2Z0 365 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 PASKQ96RG2 1323 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 F8VZ95 297 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 GOLGA8SH3BPF8 625 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 TULP2O00295 520 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 HOXA10P31260 410 aaPredicted RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 NSFP46459 744 aaKnown RBP5.29□□□□□ -1.56
SMAD4-202ENST00000398417 OTOP1Q7RTM1 612 aa5.29□□□□□ -1.56
SMAD4-202ENST00000398417 CCDC91Q7Z6B0 441 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms