RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 USP28Q96RU2 1077 aa18.48■□□□□ 0.55
APTR-201ENST00000398043 EIF2AQ9BY44 585 aaKnown RBP18.48■□□□□ 0.55
APTR-201ENST00000398043 CSRNP2Q9H175 543 aa18.48■□□□□ 0.55
APTR-201ENST00000398043 BLOC1S4Q9NUP1 217 aa18.48■□□□□ 0.55
APTR-201ENST00000398043 INPPL1O15357 1258 aa18.47■□□□□ 0.55
APTR-201ENST00000398043 HIP1RO75146 1068 aa18.47■□□□□ 0.55
APTR-201ENST00000398043 LAG3P18627 525 aa18.47■□□□□ 0.55
APTR-201ENST00000398043 GUCY2CP25092 1073 aa18.47■□□□□ 0.55
APTR-201ENST00000398043 PPP2R5AQ15172 486 aa18.47■□□□□ 0.55
APTR-201ENST00000398043 LONRF3Q496Y0 759 aa18.47■□□□□ 0.55
APTR-201ENST00000398043 NOTUMQ6P988 496 aa18.47■□□□□ 0.55
APTR-201ENST00000398043 ABI1Q8IZP0 508 aa18.47■□□□□ 0.55
APTR-201ENST00000398043 PRIMPOLQ96LW4 560 aa18.47■□□□□ 0.55
APTR-201ENST00000398043 PLIN2Q99541 437 aa18.47■□□□□ 0.55
APTR-201ENST00000398043 CCSER1Q9C0I3 900 aa18.47■□□□□ 0.55
APTR-201ENST00000398043 C2orf40Q9H1Z8 148 aa18.47■□□□□ 0.55
APTR-201ENST00000398043 THEGQ9P2T0 379 aa18.47■□□□□ 0.55
APTR-201ENST00000398043 SRPRBQ9Y5M8 271 aaKnown RBP18.47■□□□□ 0.55
APTR-201ENST00000398043 PDCD11Q14690 1871 aaKnown RBP18.47■□□□□ 0.55
APTR-201ENST00000398043 CNTNAP2Q9UHC6 1331 aa18.47■□□□□ 0.55
APTR-201ENST00000398043 XIRP2A4UGR9 3374 aa18.47■□□□□ 0.55
APTR-201ENST00000398043 CUL9Q8IWT3 2517 aa18.46■□□□□ 0.55
APTR-201ENST00000398043 MARCKSP29966 332 aaPredicted RBP18.46■□□□□ 0.55
APTR-201ENST00000398043 NASPP49321 788 aaPredicted RBP18.46■□□□□ 0.55
APTR-201ENST00000398043 AFF1P51825 1210 aaKnown RBP18.46■□□□□ 0.55
APTR-201ENST00000398043 SLC39A14Q15043 492 aa18.46■□□□□ 0.55
APTR-201ENST00000398043 TIGD5Q53EQ6 642 aa18.46■□□□□ 0.55
APTR-201ENST00000398043 ARSHQ5FYA8 562 aa18.46■□□□□ 0.55
APTR-201ENST00000398043 USP49Q70CQ1 688 aa18.46■□□□□ 0.55
APTR-201ENST00000398043 ATXN2LQ8WWM7 1075 aaKnown RBP18.46■□□□□ 0.55
APTR-201ENST00000398043 PGBD4Q96DM1 585 aa18.46■□□□□ 0.55
APTR-201ENST00000398043 KIFC3Q9BVG8 833 aa18.46■□□□□ 0.55
APTR-201ENST00000398043 AAASQ9NRG9 546 aa18.46■□□□□ 0.55
APTR-201ENST00000398043 PRMT7Q9NVM4 692 aaPredicted RBP18.46■□□□□ 0.55
APTR-201ENST00000398043 IPPQ9Y573 584 aa18.46■□□□□ 0.55
APTR-201ENST00000398043 PCDHB12Q9Y5F1 795 aa18.46■□□□□ 0.55
APTR-201ENST00000398043 TTC28Q96AY4 2481 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.45■□□□□ 0.54
APTR-201ENST00000398043 B4GALT3O60512 393 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 FGF18O76093 207 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 PLA2G4BP0C869 781 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 UBA7P41226 1012 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 NPTX2P47972 431 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 PKP1Q13835 747 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 KARSQ15046 597 aaKnown RBP18.45■□□□□ 0.54
APTR-201ENST00000398043 ZRSR1Q15695 479 aaKnown RBP18.45■□□□□ 0.54
APTR-201ENST00000398043 CSPP1Q1MSJ5 1256 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 TCEAL5Q5H9L2 206 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 NOMO2Q5JPE7 1267 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 KCNT2Q6UVM3 1135 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 ZBTB8OSQ8IWT0 167 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 CNNM3Q8NE01 707 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 POF1BQ8WVV4 589 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 EPSTI1Q96J88 318 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 TIPINQ9BVW5 301 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 MRPL9Q9BYD2 267 aaKnown RBP18.45■□□□□ 0.54
APTR-201ENST00000398043 RNF39Q9H2S5 420 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 NSUN3Q9H649 340 aaKnown RBP18.45■□□□□ 0.54
APTR-201ENST00000398043 TBC1D13Q9NVG8 400 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 KCND2Q9NZV8 630 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 ARHGAP28Q9P2N2 729 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 VCANP13611 3396 aa18.45■□□□□ 0.54
APTR-201ENST00000398043 ACKR2O00590 384 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 PDIA4P13667 645 aaKnown RBP18.44■□□□□ 0.54
APTR-201ENST00000398043 PLCG1P19174 1290 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 IRS1P35568 1242 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 PBX3P40426 434 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 EFNA5P52803 228 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 PLCB3Q01970 1234 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 CEBPZQ03701 1054 aaKnown RBP18.44■□□□□ 0.54
APTR-201ENST00000398043 UBE3AQ05086 875 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 NCBP1Q09161 790 aaKnown RBP18.44■□□□□ 0.54
APTR-201ENST00000398043 SPECC1Q5M775 1068 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 SLC27A1Q6PCB7 646 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 GLB1LQ6UWU2 654 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 TAS1R3Q7RTX0 852 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 CDR2LQ86X02 465 aaPredicted RBP18.44■□□□□ 0.54
APTR-201ENST00000398043 DEPTORQ8TB45 409 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 CDK5RAP3Q96JB5 506 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 IFT74Q96LB3 600 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 CLIC6Q96NY7 704 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 NTPCRQ9BSD7 190 aaKnown RBP18.44■□□□□ 0.54
APTR-201ENST00000398043 PDZD7Q9H5P4 517 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 NRDE2Q9H7Z3 1164 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 RSAD1Q9HA92 442 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 C17orf75Q9HAS0 396 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 COG5Q9UP83 839 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 USP20Q9Y2K6 914 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 HES2Q9Y543 173 aa18.44■□□□□ 0.54
APTR-201ENST00000398043 FSCN2O14926 492 aa18.43■□□□□ 0.54
APTR-201ENST00000398043 PRKCBP05771 671 aa18.43■□□□□ 0.54
APTR-201ENST00000398043 ZSCAN22P10073 491 aaPredicted RBP18.43■□□□□ 0.54
APTR-201ENST00000398043 PEX3P56589 373 aa18.43■□□□□ 0.54
APTR-201ENST00000398043 TFF2Q03403 129 aa18.43■□□□□ 0.54
APTR-201ENST00000398043 MAPK6Q16659 721 aa18.43■□□□□ 0.54
APTR-201ENST00000398043 SPOUT1Q5T280 376 aaKnown RBP18.43■□□□□ 0.54
APTR-201ENST00000398043 NT5DC1Q5TFE4 455 aa18.43■□□□□ 0.54
APTR-201ENST00000398043 SLC39A11Q8N1S5 342 aa18.43■□□□□ 0.54
APTR-201ENST00000398043 LINC00301Q8NCQ3 95 aa18.43■□□□□ 0.54
APTR-201ENST00000398043 HLA-CQ95604 372 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms