RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 KCNG4Q8TDN1 519 aa20.76■□□□□ 0.91
COLCA2-201ENST00000398035 FOXD4L4Q8WXT5 416 aaPredicted RBP20.76■□□□□ 0.91
COLCA2-201ENST00000398035 BSNDQ8WZ55 320 aa20.76■□□□□ 0.91
COLCA2-201ENST00000398035 LARP4BQ92615 738 aaKnown RBP20.76■□□□□ 0.91
COLCA2-201ENST00000398035 SYMPKQ92797 1274 aaKnown RBP20.76■□□□□ 0.91
COLCA2-201ENST00000398035 TRIM6Q9C030 488 aaPredicted RBP20.76■□□□□ 0.91
COLCA2-201ENST00000398035 TMEM134Q9H6X4 195 aa20.76■□□□□ 0.91
COLCA2-201ENST00000398035 TYW1Q9NV66 732 aaKnown RBP20.76■□□□□ 0.91
COLCA2-201ENST00000398035 LARSQ9P2J5 1176 aaKnown RBP20.76■□□□□ 0.91
COLCA2-201ENST00000398035 KANSL3Q9P2N6 904 aa20.76■□□□□ 0.91
COLCA2-201ENST00000398035 STK17AQ9UEE5 414 aa20.76■□□□□ 0.91
COLCA2-201ENST00000398035 ODF2LQ9ULJ1 636 aa20.76■□□□□ 0.91
COLCA2-201ENST00000398035 TTC3P53804 2025 aa20.75■□□□□ 0.91
COLCA2-201ENST00000398035 CCDC169A6NNP5 214 aa20.75■□□□□ 0.91
COLCA2-201ENST00000398035 H0YCG3 227 aa20.75■□□□□ 0.91
COLCA2-201ENST00000398035 LINC00271P0C7V0 271 aa20.75■□□□□ 0.91
COLCA2-201ENST00000398035 LAG3P18627 525 aa20.75■□□□□ 0.91
COLCA2-201ENST00000398035 NCLP19338 710 aaKnown RBP20.75■□□□□ 0.91
COLCA2-201ENST00000398035 PEX3P56589 373 aa20.75■□□□□ 0.91
COLCA2-201ENST00000398035 PRPF4BQ13523 1007 aaKnown RBP20.75■□□□□ 0.91
COLCA2-201ENST00000398035 SLC27A1Q6PCB7 646 aa20.75■□□□□ 0.91
COLCA2-201ENST00000398035 APBB1IPQ7Z5R6 666 aaPredicted RBP20.75■□□□□ 0.91
COLCA2-201ENST00000398035 SPIRE2Q8WWL2 714 aa20.75■□□□□ 0.91
COLCA2-201ENST00000398035 RAD54LQ92698 747 aa20.75■□□□□ 0.91
COLCA2-201ENST00000398035 CLIC6Q96NY7 704 aa20.75■□□□□ 0.91
COLCA2-201ENST00000398035 MICAL3Q7RTP6 2002 aa20.75■□□□□ 0.91
COLCA2-201ENST00000398035 BRD1O95696 1058 aa20.74■□□□□ 0.91
COLCA2-201ENST00000398035 PLS3P13797 630 aa20.74■□□□□ 0.91
COLCA2-201ENST00000398035 ATF7P17544 494 aaPredicted RBP20.74■□□□□ 0.91
COLCA2-201ENST00000398035 NPTX2P47972 431 aa20.74■□□□□ 0.91
COLCA2-201ENST00000398035 GATMP50440 423 aa20.74■□□□□ 0.91
COLCA2-201ENST00000398035 TMEM132AQ24JP5 1023 aa20.74■□□□□ 0.91
COLCA2-201ENST00000398035 SPECC1Q5M775 1068 aa20.74■□□□□ 0.91
COLCA2-201ENST00000398035 UBXN11Q5T124 520 aa20.74■□□□□ 0.91
COLCA2-201ENST00000398035 DAW1Q8N136 415 aa20.74■□□□□ 0.91
COLCA2-201ENST00000398035 HELQQ8TDG4 1101 aa20.74■□□□□ 0.91
COLCA2-201ENST00000398035 GDPD5Q8WTR4 605 aa20.74■□□□□ 0.91
COLCA2-201ENST00000398035 MRPL38Q96DV4 380 aaKnown RBP20.74■□□□□ 0.91
COLCA2-201ENST00000398035 ADPGKQ9BRR6 497 aa20.74■□□□□ 0.91
COLCA2-201ENST00000398035 KMT5AQ9NQR1 393 aa20.74■□□□□ 0.91
COLCA2-201ENST00000398035 BLOC1S4Q9NUP1 217 aa20.74■□□□□ 0.91
COLCA2-201ENST00000398035 N4BP3O15049 544 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 CUTAO60888 179 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 PRKCBP05771 671 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 KRT18P05783 430 aaKnown RBP20.73■□□□□ 0.91
COLCA2-201ENST00000398035 ITGA4P13612 1032 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 ABCD1P33897 745 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 CLLU1OSQ5K130 101 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 GPBP1Q86WP2 473 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 URGCPQ8TCY9 931 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 CPB2Q96IY4 423 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 CCDC113Q9H0I3 377 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 RSAD1Q9HA92 442 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 POLD4Q9HCU8 107 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 RNF19AQ9NV58 838 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 PLAGL2Q9UPG8 496 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 WDR81Q562E7 1941 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 SIP14410 1827 aa20.73■□□□□ 0.91
COLCA2-201ENST00000398035 B4GALT5O43286 388 aa20.72■□□□□ 0.91
COLCA2-201ENST00000398035 OFD1O75665 1012 aa20.72■□□□□ 0.91
COLCA2-201ENST00000398035 PPM1AP35813 382 aa20.72■□□□□ 0.91
COLCA2-201ENST00000398035 ALDH7A1P49419 539 aaKnown RBP20.72■□□□□ 0.91
COLCA2-201ENST00000398035 UBE3AQ05086 875 aa20.72■□□□□ 0.91
COLCA2-201ENST00000398035 MAPK7Q13164 816 aa20.72■□□□□ 0.91
COLCA2-201ENST00000398035 PKP1Q13835 747 aa20.72■□□□□ 0.91
COLCA2-201ENST00000398035 ARSHQ5FYA8 562 aa20.72■□□□□ 0.91
COLCA2-201ENST00000398035 NOMO2Q5JPE7 1267 aa20.72■□□□□ 0.91
COLCA2-201ENST00000398035 USP49Q70CQ1 688 aa20.72■□□□□ 0.91
COLCA2-201ENST00000398035 SV2BQ7L1I2 683 aa20.72■□□□□ 0.91
COLCA2-201ENST00000398035 IPPQ9Y573 584 aa20.72■□□□□ 0.91
COLCA2-201ENST00000398035 SFI1A8K8P3 1242 aa20.71■□□□□ 0.91
COLCA2-201ENST00000398035 DHX8Q14562 1220 aaKnown RBP20.71■□□□□ 0.91
COLCA2-201ENST00000398035 MCM6Q14566 821 aa20.71■□□□□ 0.91
COLCA2-201ENST00000398035 AGMOQ6ZNB7 445 aa20.71■□□□□ 0.91
COLCA2-201ENST00000398035 KLHL23Q8NBE8 558 aa20.71■□□□□ 0.91
COLCA2-201ENST00000398035 SMG8Q8ND04 991 aaKnown RBP20.71■□□□□ 0.91
COLCA2-201ENST00000398035 SLC17A8Q8NDX2 589 aa20.71■□□□□ 0.91
COLCA2-201ENST00000398035 EIF2AQ9BY44 585 aaKnown RBP20.71■□□□□ 0.91
COLCA2-201ENST00000398035 LRRC27Q9C0I9 530 aa20.71■□□□□ 0.91
COLCA2-201ENST00000398035 CWH43Q9H720 699 aa20.71■□□□□ 0.91
COLCA2-201ENST00000398035 ARHGAP28Q9P2N2 729 aa20.71■□□□□ 0.91
COLCA2-201ENST00000398035 PUF60Q9UHX1 559 aaKnown RBP20.71■□□□□ 0.91
COLCA2-201ENST00000398035 RCOR1Q9UKL0 485 aa20.71■□□□□ 0.91
COLCA2-201ENST00000398035 GIT1Q9Y2X7 761 aa20.71■□□□□ 0.91
COLCA2-201ENST00000398035 ME1P48163 572 aa20.7■□□□□ 0.9
COLCA2-201ENST00000398035 KRT17Q04695 432 aa20.7■□□□□ 0.9
COLCA2-201ENST00000398035 DNM1Q05193 864 aaKnown RBP20.7■□□□□ 0.9
COLCA2-201ENST00000398035 RNASELQ05823 741 aaKnown RBP20.7■□□□□ 0.9
COLCA2-201ENST00000398035 RAD51AP2Q09MP3 1159 aa20.7■□□□□ 0.9
COLCA2-201ENST00000398035 STRN3Q13033 797 aa20.7■□□□□ 0.9
COLCA2-201ENST00000398035 CCDC85BQ15834 202 aaPredicted RBP20.7■□□□□ 0.9
COLCA2-201ENST00000398035 FOXD4L6Q3SYB3 417 aaPredicted RBP20.7■□□□□ 0.9
COLCA2-201ENST00000398035 FOXD4L3Q6VB84 417 aaPredicted RBP20.7■□□□□ 0.9
COLCA2-201ENST00000398035 LRRC55Q6ZSA7 311 aa20.7■□□□□ 0.9
COLCA2-201ENST00000398035 PPM1EQ8WY54 764 aa20.7■□□□□ 0.9
COLCA2-201ENST00000398035 LPPQ93052 612 aa20.7■□□□□ 0.9
COLCA2-201ENST00000398035 ZNF558Q96NG5 402 aa20.7■□□□□ 0.9
COLCA2-201ENST00000398035 PARVGQ9HBI0 331 aa20.7■□□□□ 0.9
COLCA2-201ENST00000398035 FAM13AO94988 1023 aa20.7■□□□□ 0.9
COLCA2-201ENST00000398035 LIG1P18858 919 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms