RNA–Protein interactions for RNA: ENST00000397885.2

PUM3-202, Transcript of pumilio RNA binding family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUM3, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM3-202ENST00000397885 TOMM70O94826 608 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 NTSR2O95665 410 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 ASLP04424 464 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 ZFXP17010 805 aaPredicted RBP12.36□□□□□ -0.43
PUM3-202ENST00000397885 EIF4BP23588 611 aaKnown RBP12.36□□□□□ -0.43
PUM3-202ENST00000397885 MARK3P27448 753 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 MGAT5Q09328 741 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 AP1B1Q10567 949 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 AUHQ13825 339 aaKnown RBP12.36□□□□□ -0.43
PUM3-202ENST00000397885 DHX34Q14147 1143 aaKnown RBP12.36□□□□□ -0.43
PUM3-202ENST00000397885 SLC29A2Q14542 456 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 CRY2Q49AN0 593 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 NAALADL2Q58DX5 795 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 KLC3Q6P597 504 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 TMC4Q7Z404 712 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 NELFCDQ8IXH7 590 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 METTL13Q8N6R0 699 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 C7orf43Q8WVR3 580 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 C17orf50Q8WW18 174 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 SLC35B4Q969S0 331 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 LENG1Q96BZ8 264 aaPredicted RBP12.36□□□□□ -0.43
PUM3-202ENST00000397885 DDX27Q96GQ7 796 aaKnown RBP12.36□□□□□ -0.43
PUM3-202ENST00000397885 RUNDC3BQ96NL0 473 aa12.36□□□□□ -0.43
PUM3-202ENST00000397885 RTL9Q8NET4 1388 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 WNT7AO00755 349 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 PDE8AO60658 829 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 PRELPP51888 382 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 PTENP60484 403 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 SLC34A1Q06495 639 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 GIT2Q14161 759 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 PKN1Q16512 942 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 TMEM259Q4ZIN3 620 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 CENPPQ6IPU0 288 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 SLFN11Q7Z7L1 901 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 EXOC3L1Q86VI1 746 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 ZC3H18Q86VM9 953 aaKnown RBP12.35□□□□□ -0.43
PUM3-202ENST00000397885 SYCE1Q8N0S2 351 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 NME8Q8N427 588 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 RSPH1Q8WYR4 309 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 CATSPER2Q96P56 530 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 CCSER1Q9C0I3 900 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 DENND2DQ9H6A0 471 aaPredicted RBP12.35□□□□□ -0.43
PUM3-202ENST00000397885 NMRK2Q9NPI5 230 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 ZNF212Q9UDV6 495 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 LNPEPQ9UIQ6 1025 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 INTUQ9ULD6 942 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 USH1CQ9Y6N9 552 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 PITPNM2Q9BZ72 1349 aa12.35□□□□□ -0.43
PUM3-202ENST00000397885 MAPK13O15264 365 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 ATP9BO43861 1147 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 GNA14O95837 355 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 PABPC4LP0CB38 370 aaKnown RBP12.34□□□□□ -0.43
PUM3-202ENST00000397885 ZNF24P17028 368 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 CDK7P50613 346 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 PSMD7P51665 324 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 SLC10A5Q5PT55 438 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 RTKN2Q8IZC4 609 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 RPGRQ92834 1020 aaKnown RBP12.34□□□□□ -0.43
PUM3-202ENST00000397885 SLC7A6OSQ96CW6 309 aaPredicted RBP12.34□□□□□ -0.43
PUM3-202ENST00000397885 SHISA4Q96DD7 197 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 AGAP3Q96P47 875 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 TUBGCP4Q9UGJ1 667 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 SUN2Q9UH99 717 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 TRMT112Q9UI30 125 aaKnown RBP12.34□□□□□ -0.43
PUM3-202ENST00000397885 PASKQ96RG2 1323 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 GLTPD2A6NH11 291 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 LYNP07948 512 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 ANXA13P27216 316 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 HOXA10P31260 410 aaPredicted RBP12.34□□□□□ -0.43
PUM3-202ENST00000397885 GJA8P48165 433 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 CBX3Q13185 183 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 CNNM4Q6P4Q7 775 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 LRRC74BQ6ZQY2 392 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 ZNF654Q8IZM8 581 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 SERPINB12Q96P63 405 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 LRRC37BQ96QE4 947 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 ZNF184Q99676 751 aaPredicted RBP12.34□□□□□ -0.43
PUM3-202ENST00000397885 MYLK2Q9H1R3 596 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 DHX36Q9H2U1 1008 aaKnown RBP12.34□□□□□ -0.43
PUM3-202ENST00000397885 EPB41L1Q9H4G0 881 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 ARMT1Q9H993 441 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 RRAGCQ9HB90 399 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.34□□□□□ -0.43
PUM3-202ENST00000397885 MTRF1LQ9UGC7 380 aaKnown RBP12.34□□□□□ -0.43
PUM3-202ENST00000397885 DDX25Q9UHL0 483 aaKnown RBP12.34□□□□□ -0.43
PUM3-202ENST00000397885 RASAL2Q9UJF2 1139 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 STXBP5LQ9Y2K9 1186 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 SH3GLB1Q9Y371 365 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 STARD13Q9Y3M8 1113 aa12.34□□□□□ -0.43
PUM3-202ENST00000397885 A0A0A6YYK5 440 aaPredicted RBP12.33□□□□□ -0.44
PUM3-202ENST00000397885 TMEM120BA0PK00 339 aa12.33□□□□□ -0.44
PUM3-202ENST00000397885 GSG1L2A8MUP6 293 aa12.33□□□□□ -0.44
PUM3-202ENST00000397885 MAP3K7O43318 606 aa12.33□□□□□ -0.44
PUM3-202ENST00000397885 RAD21O60216 631 aa12.33□□□□□ -0.44
PUM3-202ENST00000397885 ITGA2BP08514 1039 aa12.33□□□□□ -0.44
PUM3-202ENST00000397885 PTPN4P29074 926 aa12.33□□□□□ -0.44
PUM3-202ENST00000397885 NPEPPSP55786 919 aa12.33□□□□□ -0.44
PUM3-202ENST00000397885 KCNMA1Q12791 1236 aa12.33□□□□□ -0.44
PUM3-202ENST00000397885 ITGA9Q13797 1035 aa12.33□□□□□ -0.44
PUM3-202ENST00000397885 CC2D2BQ6DHV5 1058 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms