RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 KLRG1Q96E93 195 aa16.52■□□□□ 0.24
LSS-202ENST00000397728 GPRC5CQ9NQ84 441 aa16.52■□□□□ 0.24
LSS-202ENST00000397728 RGPD8O14715 1765 aaPredicted RBP16.52■□□□□ 0.23
LSS-202ENST00000397728 PQBP1O60828 265 aaKnown RBP16.52■□□□□ 0.23
LSS-202ENST00000397728 SLC4A1P02730 911 aa16.52■□□□□ 0.23
LSS-202ENST00000397728 GNA15P30679 374 aa16.52■□□□□ 0.23
LSS-202ENST00000397728 DRAP1Q14919 205 aaPredicted RBP16.52■□□□□ 0.23
LSS-202ENST00000397728 NRXN3Q9Y4C0 1643 aa16.52■□□□□ 0.23
LSS-202ENST00000397728 GIPC1O14908 333 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 CRCPO75575 148 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 ALDH5A1P51649 535 aaPredicted RBP16.51■□□□□ 0.23
LSS-202ENST00000397728 SNRNP35Q16560 246 aaKnown RBP16.51■□□□□ 0.23
LSS-202ENST00000397728 MUM1L1Q5H9M0 696 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 ZNF484Q5JVG2 852 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 TNIP3Q96KP6 325 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 NPTXRO95502 500 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 FTCDO95954 541 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 MAN1A1P33908 653 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 PPP2R5EQ16537 467 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 CFAP157Q5JU67 520 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 TTC39CQ8N584 583 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 CYP2W1Q8TAV3 490 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 MAGOHBQ96A72 148 aaKnown RBP16.51■□□□□ 0.23
LSS-202ENST00000397728 ZWILCHQ9H900 591 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 CEP72Q9P209 647 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 CNOT8Q9UFF9 292 aaKnown RBP16.51■□□□□ 0.23
LSS-202ENST00000397728 SGK1O00141 431 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 TGFB3P10600 412 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 BFSP2Q13515 415 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 LGSNQ5TDP6 509 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 MOXD1Q6UVY6 613 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 CCDC170Q8IYT3 715 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 ARFGAP2Q8N6H7 521 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 SLC8A2Q9UPR5 921 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 FNDC3AQ9Y2H6 1198 aaKnown RBP16.51■□□□□ 0.23
LSS-202ENST00000397728 MAD1L1Q9Y6D9 718 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 SCINQ9Y6U3 715 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 GANCQ8TET4 914 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 PRPF31Q8WWY3 499 aaKnown RBP16.51■□□□□ 0.23
LSS-202ENST00000397728 KRT12Q99456 494 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 SAMD15Q9P1V8 674 aa16.51■□□□□ 0.23
LSS-202ENST00000397728 KRT15P19012 456 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 TLK2Q86UE8 772 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 SETD4Q9NVD3 440 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 PTPN22Q9Y2R2 807 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 PCDHB7Q9Y5E2 793 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 LRRC53A6NM62 1247 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 NDUFA10O95299 355 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 VTNP04004 478 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 TAOK1Q7L7X3 1001 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 RPUSD2Q8IZ73 545 aaKnown RBP16.5■□□□□ 0.23
LSS-202ENST00000397728 CCT6BQ92526 530 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 GDAP1L1Q96MZ0 367 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 NSRP1Q9H0G5 558 aaKnown RBP16.5■□□□□ 0.23
LSS-202ENST00000397728 NKRFO15226 690 aaKnown RBP eCLIP16.5■□□□□ 0.235e-7■■□□□ 12
LSS-202ENST00000397728 GAS2O43903 313 aaKnown RBP16.5■□□□□ 0.23
LSS-202ENST00000397728 ADCY3O60266 1144 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 PRPSAP1Q14558 356 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 SLC35F6Q8N357 371 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 NFKBIEO00221 500 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 TBC1D12O60347 775 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 ATP2C2O75185 946 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 MED24O75448 989 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 HPDP32754 393 aaPredicted RBP16.5■□□□□ 0.23
LSS-202ENST00000397728 NTRK3Q16288 839 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 APPL2Q8NEU8 664 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 PPP1R12CQ9BZL4 782 aa16.5■□□□□ 0.23
LSS-202ENST00000397728 PITPNM2Q9BZ72 1349 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 RAG1P15918 1043 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 DGKZQ13574 1117 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 SNX1Q13596 522 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 ACVR2BQ13705 512 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 DEFB128Q7Z7B8 93 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 AMIGO3Q86WK7 504 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 RAB3IL1Q8TBN0 382 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 TRIM7Q9C029 511 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 VTA1Q9NP79 307 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 KLK14Q9P0G3 267 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 ANAPC7Q9UJX3 599 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 MCF2LO15068 1137 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 SSTR3P32745 418 aaPredicted RBP16.49■□□□□ 0.23
LSS-202ENST00000397728 ADCYAP1R1P41586 468 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 SEMA3FQ13275 785 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 CYP4F22Q6NT55 531 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 FRMD5Q7Z6J6 570 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 SLC38A7Q9NVC3 462 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 RIOK3O14730 519 aaKnown RBP16.49■□□□□ 0.23
LSS-202ENST00000397728 SLC26A4O43511 780 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 PDGFRBP09619 1106 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 ATP5DP30049 168 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 CDC25BP30305 580 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 MXRA7P84157 204 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 PPARDQ03181 441 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 NCOA4Q13772 614 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 PKN1Q16512 942 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 SGO2Q562F6 1265 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 HSPH1Q92598 858 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 RPGRIP1Q96KN7 1286 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 HINFPQ9BQA5 517 aa16.49■□□□□ 0.23
LSS-202ENST00000397728 WDR18Q9BV38 432 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms