RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 TEX35Q5T0J7 233 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 MSL1Q68DK7 614 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 HDXQ7Z353 690 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 RPAINQ86UA6 219 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 BLZF1Q9H2G9 400 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 TMEM260Q9NX78 707 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 TCP10L2B9ZVM9 353 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 ACKR2O00590 384 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 MAP2K7O14733 419 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 ERVK-24P63145 666 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 UBE2SQ16763 222 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 SPECC1Q5M775 1068 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 ARHGEF16Q5VV41 709 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 MYCT1Q8N699 235 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 ATG4CQ96DT6 458 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 MMRN2Q9H8L6 949 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 MRPL47Q9HD33 250 aaKnown RBP6.35□□□□□ -1.39
PTPRD-206ENST00000397617 C2CD2Q9Y426 696 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 SQORQ9Y6N5 450 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 FCER1AP12319 257 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 ALAS1P13196 640 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 AXLP30530 894 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 C1QBPQ07021 282 aaKnown RBP6.35□□□□□ -1.39
PTPRD-206ENST00000397617 RASA2Q15283 850 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 EPC2Q52LR7 807 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 UTP14CQ5TAP6 766 aaKnown RBP6.35□□□□□ -1.39
PTPRD-206ENST00000397617 ANGEL2Q5VTE6 544 aaKnown RBP6.35□□□□□ -1.39
PTPRD-206ENST00000397617 POLNQ7Z5Q5 900 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 ABHD16BQ9H3Z7 469 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 AZI2Q9H6S1 392 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 TMEM59LQ9UK28 342 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 FAM187AA6NFU0 413 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 PODXLO00592 558 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 ZEB2O60315 1214 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 GCNT3O95395 438 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 FNTAP49354 379 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 MTMR3Q13615 1198 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 DHX34Q14147 1143 aaKnown RBP6.35□□□□□ -1.39
PTPRD-206ENST00000397617 DEFB132Q7Z7B7 95 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 STK32AQ8WU08 396 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 ERAP1Q9NZ08 941 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 NOL4O94818 638 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 CNGA1P29973 690 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 CACNB3P54284 484 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 EVX2Q03828 476 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 SPATS2Q86XZ4 545 aaKnown RBP6.35□□□□□ -1.39
PTPRD-206ENST00000397617 BBOF1Q8ND07 529 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 ABCB6Q9NP58 842 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 STIM2Q9P246 746 aa6.35□□□□□ -1.39
PTPRD-206ENST00000397617 PGRMC1O00264 195 aaKnown RBP6.34□□□□□ -1.39
PTPRD-206ENST00000397617 XPOTO43592 962 aaKnown RBP6.34□□□□□ -1.39
PTPRD-206ENST00000397617 CDR1P51861 262 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 HERVK_113P62684 666 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 PAK2Q13177 524 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 MTMR2Q13614 643 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 RAPGEF1Q13905 1077 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 BAATQ14032 418 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-206ENST00000397617 CCDC62Q6P9F0 684 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 DRICH1Q6PGQ1 229 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-206ENST00000397617 NSMFQ6X4W1 530 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 SYT10Q6XYQ8 523 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 CAVIN3Q969G5 261 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 TLR10Q9BXR5 811 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 FAM107BQ9H098 131 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 GCNT4Q9P109 453 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 BCS1LQ9Y276 419 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.34□□□□□ -1.39
PTPRD-206ENST00000397617 TESPA1A2RU30 521 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-206ENST00000397617 EML1O00423 815 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 EXTL3O43909 919 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 CAND2O75155 1236 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 ALDH1A1P00352 501 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 GTF2A2P52657 109 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 ASIC2Q16515 512 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 KIAA0753Q2KHM9 967 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 EAPPQ56P03 285 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-206ENST00000397617 PARK7Q99497 189 aaKnown RBP6.34□□□□□ -1.39
PTPRD-206ENST00000397617 EVPLQ92817 2033 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 SIP14410 1827 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 GRIN2DO15399 1336 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 SLC15A5A6NIM6 579 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 OGTO15294 1046 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 PAEPP09466 180 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 EPHB4P54760 987 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 SLC30A5Q8TAD4 765 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 LMO3Q8TAP4 145 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 P3H4Q92791 437 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 TMEM109Q9BVC6 243 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 RAB17Q9H0T7 212 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 PRRC2BQ5JSZ5 2229 aaKnown RBP6.34□□□□□ -1.39
PTPRD-206ENST00000397617 MAFO75444 373 aaPredicted RBP6.34□□□□□ -1.39
PTPRD-206ENST00000397617 ADRB2P07550 413 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 PTPN7P35236 360 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 HOXD13P35453 343 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 ARL2P36404 184 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 TAF2Q6P1X5 1199 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 IFT20Q8IY31 132 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 SYCP3Q8IZU3 236 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 RASGEF1CQ8N431 466 aa6.34□□□□□ -1.39
PTPRD-206ENST00000397617 LRRC57Q8N9N7 239 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms