RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 CAPSQ13938 189 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 NOMO2Q5JPE7 1267 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 CLLU1OSQ5K130 101 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 PADI6Q6TGC4 694 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 KCNT2Q6UVM3 1135 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 HELQQ8TDG4 1101 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 SNX29Q8TEQ0 813 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 IFT74Q96LB3 600 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 AK8Q96MA6 479 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 TIPINQ9BVW5 301 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 NGRNQ9NPE2 291 aaKnown RBP15.45■□□□□ 0.06
SEC13-204ENST00000397099 BMP2KQ9NSY1 1161 aaPredicted RBP15.45■□□□□ 0.06
SEC13-204ENST00000397099 RNF19AQ9NV58 838 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 SPG21Q9NZD8 308 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 ATG2AQ2TAZ0 1938 aa15.45■□□□□ 0.06
SEC13-204ENST00000397099 MYO7AQ13402 2215 aa15.44■□□□□ 0.06
SEC13-204ENST00000397099 GRXCR2A6NFK2 248 aa15.44■□□□□ 0.06
SEC13-204ENST00000397099 NCLP19338 710 aaKnown RBP15.44■□□□□ 0.06
SEC13-204ENST00000397099 NAMPTP43490 491 aa15.44■□□□□ 0.06
SEC13-204ENST00000397099 EFNA5P52803 228 aa15.44■□□□□ 0.06
SEC13-204ENST00000397099 MBTD1Q05BQ5 628 aa15.44■□□□□ 0.06
SEC13-204ENST00000397099 HYAL1Q12794 435 aa15.44■□□□□ 0.06
SEC13-204ENST00000397099 NBR1Q14596 966 aa15.44■□□□□ 0.06
SEC13-204ENST00000397099 FAM187BQ17R55 369 aa15.44■□□□□ 0.06
SEC13-204ENST00000397099 CDCA2Q69YH5 1023 aaPredicted RBP15.44■□□□□ 0.06
SEC13-204ENST00000397099 ASAP3Q8TDY4 903 aa15.44■□□□□ 0.06
SEC13-204ENST00000397099 MRPS27Q92552 414 aaKnown RBP15.44■□□□□ 0.06
SEC13-204ENST00000397099 TRIM6Q9C030 488 aaPredicted RBP15.44■□□□□ 0.06
SEC13-204ENST00000397099 CSRNP2Q9H175 543 aa15.44■□□□□ 0.06
SEC13-204ENST00000397099 MINDY3Q9H8M7 445 aa15.44■□□□□ 0.06
SEC13-204ENST00000397099 KIAA1024Q9UPX6 916 aa15.44■□□□□ 0.06
SEC13-204ENST00000397099 LRRIQ4A6NIV6 560 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 TSPAN1O60635 241 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 EYA4O95677 639 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 SRGAP2BP0DMP2 458 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 DNAJB1P25685 340 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 RNASELQ05823 741 aaKnown RBP15.43■□□□□ 0.06
SEC13-204ENST00000397099 CLUL1Q15846 466 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 CTC1Q2NKJ3 1217 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 SLC27A1Q6PCB7 646 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 PPP4R3CPQ6ZMV5 832 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 LRRC55Q6ZSA7 311 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 APBB1IPQ7Z5R6 666 aaPredicted RBP15.43■□□□□ 0.06
SEC13-204ENST00000397099 FAM178BQ8IXR5 827 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 MICAL1Q8TDZ2 1067 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 TMEM169Q96HH4 297 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 BHMT2Q9H2M3 363 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 EPHX3Q9H6B9 360 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 RSAD1Q9HA92 442 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 C17orf75Q9HAS0 396 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 DDX19AQ9NUU7 478 aaKnown RBP15.43■□□□□ 0.06
SEC13-204ENST00000397099 KCND2Q9NZV8 630 aa15.43■□□□□ 0.06
SEC13-204ENST00000397099 INPPL1O15357 1258 aa15.42■□□□□ 0.06
SEC13-204ENST00000397099 OFD1O75665 1012 aa15.42■□□□□ 0.06
SEC13-204ENST00000397099 ITGA4P13612 1032 aa15.42■□□□□ 0.06
SEC13-204ENST00000397099 GTF2F1P35269 517 aaKnown RBP eCLIP15.42■□□□□ 0.06
SEC13-204ENST00000397099 NDUFV1P49821 464 aa15.42■□□□□ 0.06
SEC13-204ENST00000397099 CAMK1Q14012 370 aa15.42■□□□□ 0.06
SEC13-204ENST00000397099 GIT2Q14161 759 aa15.42■□□□□ 0.06
SEC13-204ENST00000397099 MAPK6Q16659 721 aa15.42■□□□□ 0.06
SEC13-204ENST00000397099 HYIQ5T013 277 aa15.42■□□□□ 0.06
SEC13-204ENST00000397099 GJD3Q8N144 294 aa15.42■□□□□ 0.06
SEC13-204ENST00000397099 EFHBQ8N7U6 833 aa15.42■□□□□ 0.06
SEC13-204ENST00000397099 DEPTORQ8TB45 409 aa15.42■□□□□ 0.06
SEC13-204ENST00000397099 DRC1Q96MC2 740 aa15.42■□□□□ 0.06
SEC13-204ENST00000397099 CD320Q9NPF0 282 aa15.42■□□□□ 0.06
SEC13-204ENST00000397099 A0A1B0GUA9 196 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 N4BP3O15049 544 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 NR1I2O75469 434 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 IRS1P35568 1242 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 BCAR1P56945 870 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 AMHR2Q16671 573 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 UBXN11Q5T124 520 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 RBM23Q86U06 439 aaKnown RBP15.41■□□□□ 0.06
SEC13-204ENST00000397099 SLC39A11Q8N1S5 342 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 CDK5RAP3Q96JB5 506 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 FAM193BQ96PV7 902 aaPredicted RBP15.41■□□□□ 0.06
SEC13-204ENST00000397099 TMEM175Q9BSA9 504 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 FZD8Q9H461 694 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 TLE6Q9H808 572 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 TBC1D13Q9NVG8 400 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 HCSTQ9UBK5 93 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 PRKAG3Q9UGI9 489 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 GIT1Q9Y2X7 761 aa15.41■□□□□ 0.06
SEC13-204ENST00000397099 C5orf42Q9H799 3197 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 VPS37CA5D8V6 355 aaPredicted RBP15.4■□□□□ 0.06
SEC13-204ENST00000397099 VWA3AA6NCI4 1184 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 K7ELQ4 463 aaPredicted RBP15.4■□□□□ 0.06
SEC13-204ENST00000397099 ACKR2O00590 384 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 FSCN2O14926 492 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 LINC01565O15544 149 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 ALDH2P05091 517 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 ARF4P18085 180 aaPredicted RBP15.4■□□□□ 0.06
SEC13-204ENST00000397099 SCP2P22307 547 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 LONP1P36776 959 aaKnown RBP15.4■□□□□ 0.06
SEC13-204ENST00000397099 LTBRP36941 435 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 NRIP1P48552 1158 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 DLX2Q07687 328 aaPredicted RBP15.4■□□□□ 0.06
SEC13-204ENST00000397099 ADAM15Q13444 863 aa15.4■□□□□ 0.06
SEC13-204ENST00000397099 SMC1AQ14683 1233 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms