RNA–Protein interactions for RNA: ENST00000397041.7

ATP2A3-205, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ATP2A3, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-205ENST00000397041 TPCN2Q8NHX9 752 aa16.89■□□□□ 0.29
ATP2A3-205ENST00000397041 SCYL1Q96KG9 808 aa16.89■□□□□ 0.29
ATP2A3-205ENST00000397041 INO80BQ9C086 356 aaPredicted RBP16.89■□□□□ 0.29
ATP2A3-205ENST00000397041 TDRD3Q9H7E2 651 aaKnown RBP16.89■□□□□ 0.29
ATP2A3-205ENST00000397041 APEX2Q9UBZ4 518 aa16.89■□□□□ 0.29
ATP2A3-205ENST00000397041 ENO4A6NNW6 628 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 PRLRP16471 622 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 DUSP9Q99956 384 aaKnown RBP16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 TLR10Q9BXR5 811 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 TECPR2O15040 1411 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 FLT1P17948 1338 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 ZNF335Q9H4Z2 1342 aaPredicted RBP16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 CRCPO75575 148 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 IGBP1P78318 339 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 GPSM2P81274 684 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 PDIA2Q13087 525 aaKnown RBP16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 CDO1Q16878 200 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 C4orf33Q8N1A6 199 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 DIP2AQ14689 1571 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 P4HA1P13674 534 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 NCF2P19878 526 aaPredicted RBP16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 COMTP21964 271 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 CDR2Q01850 454 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 EDRF1Q3B7T1 1238 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 MAP3K21Q5TCX8 1036 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 RCSD1Q6JBY9 416 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 BARGINQ6ZT62 677 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 HSPH1Q92598 858 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 DENND3A2RUS2 1198 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 RNF225M0QZC1 329 aaPredicted RBP16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 IPO5O00410 1097 aaKnown RBP16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 EYA4O95677 639 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 SLC12A2P55011 1212 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 SNX16P57768 344 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 FIGNQ5HY92 759 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 CREG2Q8IUH2 290 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 KIAA0895Q8NCT3 520 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 DCAF4Q8WV16 495 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 CALR3Q96L12 384 aaKnown RBP16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 PAGR1Q9BTK6 254 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 STOML1Q9UBI4 398 aa16.88■□□□□ 0.29
ATP2A3-205ENST00000397041 PHF2O75151 1096 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 TRPA1O75762 1119 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 HAUS5O94927 633 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 NTSR2O95665 410 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 SMAD1Q15797 465 aaKnown RBP16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 RINT1Q6NUQ1 792 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 TTC1Q99614 292 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 COA1Q9GZY4 146 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 HESX1Q9UBX0 185 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 TNS3Q68CZ2 1445 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 K7ERI5 159 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 TLR3O15455 904 aaKnown RBP16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 RAD17O75943 681 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 SYF2O95926 243 aaKnown RBP16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 ITGA4P13612 1032 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 SCP2P22307 547 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 CRKP46108 304 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 PDE1CQ14123 709 aaPredicted RBP16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 GRAMD1BQ3KR37 738 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 ERICH1Q86X53 443 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 CDKL2Q92772 493 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 SMYD3Q9H7B4 428 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 RCCD1A6NED2 376 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 CAND2O75155 1236 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 FGFR2P21802 821 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 PSMA2P25787 234 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 FBXO33Q7Z6M2 555 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 TMEM139Q8IV31 216 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 DTX3LQ8TDB6 740 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 ARHGEF1Q92888 912 aaKnown RBP16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 PCSK1NQ9UHG2 260 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 ANKMY2Q8IV38 441 aa16.87■□□□□ 0.29
ATP2A3-205ENST00000397041 FXR2P51116 673 aaKnown RBP eCLIP16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 ARL4CP56559 192 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 SYCP2LQ5T4T6 812 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 KRT39Q6A163 491 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 SLC17A8Q8NDX2 589 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 ERP27Q96DN0 273 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 THAP2Q9H0W7 228 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 TMBIM4Q9HC24 238 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 NOD2Q9HC29 1040 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 OSGEPQ9NPF4 335 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 LRRC10BA6NIK2 292 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 IGF2BP3O00425 579 aaKnown RBP eCLIP16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 COPEO14579 308 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 CASP4P49662 377 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 NFIXQ14938 502 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 SF3B3Q15393 1217 aaKnown RBP16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 EPC2Q52LR7 807 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 HAUS6Q7Z4H7 955 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 JMJD4Q9H9V9 463 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 PFASO15067 1338 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 IQANK1A0A1B0GTG1 560 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 FAM237AA0A1B0GTK4 181 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 CCDC195A0A1B0GUA6 201 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 RSPH10B2B2RC85 870 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 CFLARO15519 480 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 RSPH10BP0C881 870 aa16.86■□□□□ 0.29
ATP2A3-205ENST00000397041 TMCO4Q5TGY1 634 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms