RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 KLRC3Q07444 240 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 IER5Q5VY09 327 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 CLEC4GQ6UXB4 293 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 PCDHB8Q9UN66 801 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 KDM5CP41229 1560 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 PRKCBP05771 671 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 NSUN7Q8NE18 718 aaKnown RBP18.54■□□□□ 0.56
MCF2L-208ENST00000397030 ANKARQ7Z5J8 1434 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 ITGA4P13612 1032 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 KCNA2P16389 499 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 AARS2Q5JTZ9 985 aaKnown RBP18.54■□□□□ 0.56
MCF2L-208ENST00000397030 AGR3Q8TD06 166 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 TMEM143Q96AN5 459 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 MAN1C1Q9NR34 630 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 CFAP43Q8NDM7 1665 aa18.54■□□□□ 0.56
MCF2L-208ENST00000397030 COPS2P61201 443 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 CDK17Q00537 523 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 SH2D3AQ9BRG2 576 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 TSSK1BQ9BXA7 367 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 SEL1LQ9UBV2 794 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 SFNP31947 248 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 TMEM63CQ9P1W3 806 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 STAT5BP51692 787 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 KIF23Q02241 960 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-208ENST00000397030 C11orf74Q86VG3 221 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 XXYLT1Q8NBI6 393 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 JPH1Q9HDC5 661 aaPredicted RBP18.53■□□□□ 0.56
MCF2L-208ENST00000397030 POLRMTO00411 1230 aaKnown RBP18.53■□□□□ 0.56
MCF2L-208ENST00000397030 RGS7P49802 495 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 HAUS6Q7Z4H7 955 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 LRRC8AQ8IWT6 810 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 FGFR1OP2Q9NVK5 253 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 CFAP74Q9C0B2 1584 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 PHLPP2Q6ZVD8 1323 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 NR3C1P04150 777 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 ADGRL3Q9HAR2 1447 aa18.53■□□□□ 0.56
MCF2L-208ENST00000397030 P4HBP07237 508 aaKnown RBP18.52■□□□□ 0.56
MCF2L-208ENST00000397030 VAMP7P51809 220 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 ZNF746Q6NUN9 644 aaPredicted RBP18.52■□□□□ 0.56
MCF2L-208ENST00000397030 RNF180Q86T96 592 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 EFHBQ8N7U6 833 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 THAP9Q9H5L6 903 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 IPO5O00410 1097 aaKnown RBP18.52■□□□□ 0.56
MCF2L-208ENST00000397030 GH1P01241 217 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 COBLL1Q53SF7 1204 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 KRT80Q6KB66 452 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 STKLD1Q8NE28 680 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 CYTH2Q99418 400 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 KIAA1586Q9HCI6 787 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 ZMYM4Q5VZL5 1548 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 COPEO14579 308 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 TMPRSS15P98073 1019 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 NUDT12Q9BQG2 462 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 UNC45AQ9H3U1 944 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 LRRC53A6NM62 1247 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 EEF1DP29692 281 aaKnown RBP18.52■□□□□ 0.56
MCF2L-208ENST00000397030 ETFBP38117 255 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 GNASQ5JWF2 1037 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 STX18Q9P2W9 335 aaKnown RBP18.52■□□□□ 0.56
MCF2L-208ENST00000397030 CPDO75976 1380 aa18.52■□□□□ 0.56
MCF2L-208ENST00000397030 CALB1P05937 261 aa18.52■□□□□ 0.55
MCF2L-208ENST00000397030 GMPSP49915 693 aaPredicted RBP18.52■□□□□ 0.55
MCF2L-208ENST00000397030 TPI1P60174 286 aa18.52■□□□□ 0.55
MCF2L-208ENST00000397030 NFIXQ14938 502 aa18.52■□□□□ 0.55
MCF2L-208ENST00000397030 PCSK7Q16549 785 aa18.52■□□□□ 0.55
MCF2L-208ENST00000397030 SPDYAQ5MJ70 313 aa18.52■□□□□ 0.55
MCF2L-208ENST00000397030 LDHDQ86WU2 507 aa18.52■□□□□ 0.55
MCF2L-208ENST00000397030 CACNA2D2Q9NY47 1150 aa18.52■□□□□ 0.55
MCF2L-208ENST00000397030 GGPS1O95749 300 aa18.52■□□□□ 0.55
MCF2L-208ENST00000397030 DPCR1Q3MIW9 517 aa18.52■□□□□ 0.55
MCF2L-208ENST00000397030 NUP85Q9BW27 656 aa18.52■□□□□ 0.55
MCF2L-208ENST00000397030 NDST4Q9H3R1 872 aa18.52■□□□□ 0.55
MCF2L-208ENST00000397030 PTPN12Q05209 780 aaKnown RBP18.51■□□□□ 0.55
MCF2L-208ENST00000397030 SNX17Q15036 470 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 KIZQ2M2Z5 673 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 L3MBTL3Q96JM7 780 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-208ENST00000397030 FOPNLQ96NB1 174 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 TRIM62Q9BVG3 475 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 PSMD14O00487 310 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 LRRC74AQ0VAA2 488 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 FLOT2Q14254 428 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 CRLF3Q8IUI8 442 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 SMAP1Q8IYB5 467 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-208ENST00000397030 MAP4K1Q92918 833 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 SMYD3Q9H7B4 428 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 ZSCAN32Q9NX65 697 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 SLC25A13Q9UJS0 675 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 ZNF197O14709 1029 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 THPOP40225 353 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 CCDC85BQ15834 202 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-208ENST00000397030 CCDC197Q8NCU1 140 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 RAD54LQ92698 747 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 IGFLR1Q9H665 355 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 PACSIN2Q9UNF0 486 aaPredicted RBP18.51■□□□□ 0.55
MCF2L-208ENST00000397030 IGFBP4P22692 258 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 CHRNA3P32297 505 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 ROR1Q01973 937 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 FASTKD1Q53R41 847 aaKnown RBP18.51■□□□□ 0.55
MCF2L-208ENST00000397030 PBKQ96KB5 322 aa18.51■□□□□ 0.55
MCF2L-208ENST00000397030 UPF3AQ9H1J1 476 aaKnown RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms