RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 ARHGEF6Q15052 776 aa12.87□□□□□ -0.35
ATN1-202ENST00000396684 ARSHQ5FYA8 562 aa12.87□□□□□ -0.35
ATN1-202ENST00000396684 GPR161Q8N6U8 529 aaKnown RBP12.87□□□□□ -0.35
ATN1-202ENST00000396684 LENG9Q96B70 501 aa12.87□□□□□ -0.35
ATN1-202ENST00000396684 APEX2Q9UBZ4 518 aa12.87□□□□□ -0.35
ATN1-202ENST00000396684 PLAGL2Q9UPG8 496 aa12.87□□□□□ -0.35
ATN1-202ENST00000396684 FHOD1Q9Y613 1164 aa12.87□□□□□ -0.35
ATN1-202ENST00000396684 UBA1P22314 1058 aaKnown RBP12.86□□□□□ -0.35
ATN1-202ENST00000396684 ACOT2P49753 483 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 TNFAIP2Q03169 654 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 TBX2Q13207 712 aaPredicted RBP12.86□□□□□ -0.35
ATN1-202ENST00000396684 CBWD1Q9BRT8 395 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 MYH8P13535 1937 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 GNAT1P11488 350 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 SOX5P35711 763 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 SLC8A3P57103 927 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 CCDC60Q8IWA6 550 aaPredicted RBP12.86□□□□□ -0.35
ATN1-202ENST00000396684 CCDC26Q8TAB7 109 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 DNAJC7Q99615 494 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 TARS2Q9BW92 718 aaKnown RBP12.86□□□□□ -0.35
ATN1-202ENST00000396684 CPA4Q9UI42 421 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 ZNF536O15090 1300 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 XPOTO43592 962 aaKnown RBP12.86□□□□□ -0.35
ATN1-202ENST00000396684 ATF7P17544 494 aaPredicted RBP12.86□□□□□ -0.35
ATN1-202ENST00000396684 ADORA2AP29274 412 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 SREBF2Q12772 1141 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 IFT81Q8WYA0 676 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 ZNF653Q96CK0 615 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 NFASCO94856 1347 aa12.86□□□□□ -0.35
ATN1-202ENST00000396684 ASAP2O43150 1006 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 THAP12O43422 761 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 NAMPTP43490 491 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 SLC26A2P50443 739 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 MYBPC2Q14324 1141 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 MFSD14CQ5VZR4 134 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 EFCAB12Q6NXP0 572 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 ARMCX2Q7L311 632 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 STK33Q9BYT3 514 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 LAMB1P07942 1786 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 SPATA31C2B4DYI2 1134 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 MAP3K10Q02779 954 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 KLHDC7AQ5VTJ3 777 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 RNF169Q8NCN4 708 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 WNK4Q96J92 1243 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 IRX2Q9BZI1 471 aaPredicted RBP12.85□□□□□ -0.35
ATN1-202ENST00000396684 USTQ9Y2C2 406 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 OPLAHO14841 1288 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 TLR3O15455 904 aaKnown RBP12.85□□□□□ -0.35
ATN1-202ENST00000396684 FTCDO95954 541 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 CD58P19256 250 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 SOX10P56693 466 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 CBX1P83916 185 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 SH3D19Q5HYK7 790 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 LRRC55Q6ZSA7 311 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 ST7Q9NRC1 585 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 DAAM1Q9Y4D1 1078 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 GSTTP1A0A1W2PQM5 241 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 SPDYE4A6NLX3 237 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 SNX16P57768 344 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 KCNA1Q09470 495 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 LMBRD2Q68DH5 695 aaPredicted RBP12.85□□□□□ -0.35
ATN1-202ENST00000396684 KLHL7Q8IXQ5 586 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 WDR24Q96S15 920 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 MAF1Q9H063 256 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 BTBD7Q9P203 1132 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 PARP2Q9UGN5 583 aa12.85□□□□□ -0.35
ATN1-202ENST00000396684 A0A0G2JLL6 359 aaPredicted RBP12.84□□□□□ -0.35
ATN1-202ENST00000396684 MANSC4A6NHS7 340 aaPredicted RBP12.84□□□□□ -0.35
ATN1-202ENST00000396684 GPC3P51654 580 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 CLUL1Q15846 466 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 DGKDQ16760 1214 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 ENOSF1Q7L5Y1 443 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 PRRT2Q7Z6L0 340 aaPredicted RBP12.84□□□□□ -0.35
ATN1-202ENST00000396684 IPO4Q8TEX9 1081 aaKnown RBP12.84□□□□□ -0.35
ATN1-202ENST00000396684 TRIM11Q96F44 468 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 P4HA2O15460 535 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 IFFO1Q0D2I5 559 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 MESDQ14696 234 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 SLC18A3Q16572 532 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 NYAP1Q6ZVC0 841 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 RNF10Q8N5U6 811 aaKnown RBP12.84□□□□□ -0.35
ATN1-202ENST00000396684 C7orf31Q8N865 590 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 RABGGTAQ92696 567 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 LYPLA2O95372 231 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 YBX3P16989 372 aaKnown RBP eCLIP12.84□□□□□ -0.351e-7■□□□□ 9
ATN1-202ENST00000396684 PLCB3Q01970 1234 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 SESTD1Q86VW0 696 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 GLYCTKQ8IVS8 523 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 ATP8B4Q8TF62 1192 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 SPIRE2Q8WWL2 714 aa12.84□□□□□ -0.35
ATN1-202ENST00000396684 PRPF31Q8WWY3 499 aaKnown RBP12.84□□□□□ -0.35
ATN1-202ENST00000396684 SYN2Q92777 582 aaPredicted RBP12.84□□□□□ -0.35
ATN1-202ENST00000396684 GCOM2Q9BZD3 368 aaPredicted RBP12.84□□□□□ -0.35
ATN1-202ENST00000396684 ANO9A1A5B4 782 aa12.83□□□□□ -0.36
ATN1-202ENST00000396684 ATP2A1O14983 1001 aa12.83□□□□□ -0.36
ATN1-202ENST00000396684 POLR2BP30876 1174 aaKnown RBP12.83□□□□□ -0.36
ATN1-202ENST00000396684 DUOXA2Q1HG44 320 aa12.83□□□□□ -0.36
ATN1-202ENST00000396684 ZNF667Q5HYK9 610 aa12.83□□□□□ -0.36
ATN1-202ENST00000396684 TRIM65Q6PJ69 517 aa12.83□□□□□ -0.36
ATN1-202ENST00000396684 SCARA5Q6ZMJ2 495 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms