RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 RFC5P40937 340 aa19.6■□□□□ 0.73
EXOSC3-202ENST00000396521 SSRP1Q08945 709 aaKnown RBP19.6■□□□□ 0.73
EXOSC3-202ENST00000396521 NCBP1Q09161 790 aaKnown RBP19.6■□□□□ 0.73
EXOSC3-202ENST00000396521 LETM2Q2VYF4 491 aa19.6■□□□□ 0.73
EXOSC3-202ENST00000396521 ANO5Q75V66 913 aa19.6■□□□□ 0.73
EXOSC3-202ENST00000396521 BLIDQ8IZY5 108 aa19.6■□□□□ 0.73
EXOSC3-202ENST00000396521 ETNPPLQ8TBG4 499 aa19.6■□□□□ 0.73
EXOSC3-202ENST00000396521 PSPC1Q8WXF1 523 aaKnown RBP19.6■□□□□ 0.73
EXOSC3-202ENST00000396521 NXPE3Q969Y0 559 aa19.6■□□□□ 0.73
EXOSC3-202ENST00000396521 GBP3Q9H0R5 595 aa19.6■□□□□ 0.73
EXOSC3-202ENST00000396521 DNAJB4Q9UDY4 337 aa19.6■□□□□ 0.73
EXOSC3-202ENST00000396521 DUSP12Q9UNI6 340 aa19.6■□□□□ 0.73
EXOSC3-202ENST00000396521 MYO10Q9HD67 2058 aa19.6■□□□□ 0.73
EXOSC3-202ENST00000396521 SPTBN4Q9H254 2564 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 CPLX1O14810 134 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 NR1I2O75469 434 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 URODP06132 367 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 ADH1AP07327 375 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 CNPP09543 421 aaKnown RBP19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 CPA1P15085 419 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 PPP2R5CQ13362 524 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 AGMOQ6ZNB7 445 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 OTUD6AQ7L8S5 288 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 ASCL5Q7RTU5 278 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 KRT25Q7Z3Z0 450 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 GPR65Q8IYL9 337 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 HDAC7Q8WUI4 952 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 TCP11Q8WWU5 503 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 SEMA4AQ9H3S1 761 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 KCNK12Q9HB15 430 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 DDX25Q9UHL0 483 aaKnown RBP19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 FBXL21Q9UKT6 434 aa19.59■□□□□ 0.73
EXOSC3-202ENST00000396521 EPB41L2O43491 1005 aaKnown RBP19.58■□□□□ 0.72
EXOSC3-202ENST00000396521 REC8O95072 547 aa19.58■□□□□ 0.72
EXOSC3-202ENST00000396521 TDP2O95551 362 aa19.58■□□□□ 0.72
EXOSC3-202ENST00000396521 SOD2P04179 222 aa19.58■□□□□ 0.72
EXOSC3-202ENST00000396521 P4HBP07237 508 aaKnown RBP19.58■□□□□ 0.72
EXOSC3-202ENST00000396521 GCFC2P16383 781 aaKnown RBP19.58■□□□□ 0.72
EXOSC3-202ENST00000396521 ERMP1Q7Z2K6 904 aa19.58■□□□□ 0.72
EXOSC3-202ENST00000396521 ZNF280BQ86YH2 543 aa19.58■□□□□ 0.72
EXOSC3-202ENST00000396521 FLCNQ8NFG4 579 aa19.58■□□□□ 0.72
EXOSC3-202ENST00000396521 BCL7CQ8WUZ0 217 aaPredicted RBP19.58■□□□□ 0.72
EXOSC3-202ENST00000396521 CCDC51Q96ER9 411 aa19.58■□□□□ 0.72
EXOSC3-202ENST00000396521 NAP1L4Q99733 375 aaKnown RBP19.58■□□□□ 0.72
EXOSC3-202ENST00000396521 VN1R3Q9BXE9 311 aa19.58■□□□□ 0.72
EXOSC3-202ENST00000396521 DHX33Q9H6R0 707 aaKnown RBP19.58■□□□□ 0.72
EXOSC3-202ENST00000396521 WNT16Q9UBV4 365 aa19.58■□□□□ 0.72
EXOSC3-202ENST00000396521 M0R2N6 131 aa19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 NCLP19338 710 aaKnown RBP19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 AXLP30530 894 aa19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 CCT2P78371 535 aaKnown RBP19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 LONRF3Q496Y0 759 aa19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 PPP4R3AQ6IN85 833 aa19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 KANK3Q6NY19 840 aa19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 KSR1Q8IVT5 923 aa19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 CCDC105Q8IYK2 499 aa19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 PRPF31Q8WWY3 499 aaKnown RBP19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 GJA10Q969M2 543 aa19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 ZNF274Q96GC6 653 aaPredicted RBP19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 CEP170P1Q96L14 293 aa19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 RPS6KC1Q96S38 1066 aa19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 SMOC2Q9H3U7 446 aa19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 MYO15AQ9UKN7 3530 aa19.57■□□□□ 0.72
EXOSC3-202ENST00000396521 TMEM150BA6NC51 233 aa19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 MEIS3P2A8K0S8 358 aa19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 NRP1O14786 923 aa19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 TBX3O15119 743 aa19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 INPPL1O15357 1258 aa19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 DDHD2O94830 711 aa19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 HOXA11P31270 313 aaPredicted RBP19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 LAMTOR4Q0VGL1 99 aa19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 MXD4Q14582 209 aaPredicted RBP19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 C4orf19Q8IY42 314 aa19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 HACE1Q8IYU2 909 aa19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 SH2D3AQ9BRG2 576 aa19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 SLKQ9H2G2 1235 aaPredicted RBP19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 PLEKHA4Q9H4M7 779 aa19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 NCOA5Q9HCD5 579 aaKnown RBP19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 WDR6Q9NNW5 1121 aaKnown RBP19.56■□□□□ 0.72
EXOSC3-202ENST00000396521 ERLIN2O94905 339 aa19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 PAPLNO95428 1278 aa19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 GLUD1P00367 558 aa19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 SRGAP2CP0DJJ0 459 aa19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 ITGA4P13612 1032 aa19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 POU5F1BQ06416 359 aa19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 CWF19L1Q69YN2 538 aaKnown RBP19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 RUFY3Q7L099 469 aa19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 FRMD5Q7Z6J6 570 aa19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 HERC2P3Q9BVR0 1158 aa19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 RXFP1Q9HBX9 757 aa19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 KCNMB3Q9NPA1 279 aa19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 EPS15L1Q9UBC2 864 aa19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 GVINP1Q7Z2Y8 2422 aa19.55■□□□□ 0.72
EXOSC3-202ENST00000396521 NPR3P17342 541 aa19.54■□□□□ 0.72
EXOSC3-202ENST00000396521 XBP1P17861 261 aa19.54■□□□□ 0.72
EXOSC3-202ENST00000396521 AK2P54819 239 aa19.54■□□□□ 0.72
EXOSC3-202ENST00000396521 EPHA7Q15375 998 aa19.54■□□□□ 0.72
EXOSC3-202ENST00000396521 PLA2G4FQ68DD2 849 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms