RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 INTUQ9ULD6 942 aa16.24■□□□□ 0.19
CBX3-202ENST00000396386 MAFBQ9Y5Q3 323 aaPredicted RBP16.24■□□□□ 0.19
CBX3-202ENST00000396386 SCN4AP35499 1836 aa16.24■□□□□ 0.19
CBX3-202ENST00000396386 ADGRA3Q8IWK6 1321 aa16.23■□□□□ 0.19
CBX3-202ENST00000396386 GOLGA8IPA6NC78 632 aa16.23■□□□□ 0.19
CBX3-202ENST00000396386 GOLGA8JA6NMD2 632 aa16.23■□□□□ 0.19
CBX3-202ENST00000396386 PDE2AO00408 941 aaPredicted RBP16.23■□□□□ 0.19
CBX3-202ENST00000396386 DDX3XO00571 662 aaKnown RBP eCLIP16.23■□□□□ 0.194e-23■■□□□ 12.3
CBX3-202ENST00000396386 PMM2O15305 246 aa16.23■□□□□ 0.19
CBX3-202ENST00000396386 CNMDO75829 334 aa16.23■□□□□ 0.19
CBX3-202ENST00000396386 SLC25A27O95847 323 aa16.23■□□□□ 0.19
CBX3-202ENST00000396386 CNGA1P29973 690 aa16.23■□□□□ 0.19
CBX3-202ENST00000396386 ADSSP30520 456 aa16.23■□□□□ 0.19
CBX3-202ENST00000396386 MCCD1P59942 119 aaPredicted RBP16.23■□□□□ 0.19
CBX3-202ENST00000396386 DPY19L2Q6NUT2 758 aa16.23■□□□□ 0.19
CBX3-202ENST00000396386 CREG2Q8IUH2 290 aa16.23■□□□□ 0.19
CBX3-202ENST00000396386 ZSWIM2Q8NEG5 633 aa16.23■□□□□ 0.19
CBX3-202ENST00000396386 ZNF526Q8TF50 670 aaPredicted RBP16.23■□□□□ 0.19
CBX3-202ENST00000396386 ZC3H15Q8WU90 426 aaKnown RBP16.23■□□□□ 0.19
CBX3-202ENST00000396386 HNRNPLLQ8WVV9 542 aaKnown RBP16.23■□□□□ 0.19
CBX3-202ENST00000396386 MPHOSPH6Q99547 160 aaKnown RBP16.23■□□□□ 0.19
CBX3-202ENST00000396386 KCNG1Q9UIX4 513 aa16.23■□□□□ 0.19
CBX3-202ENST00000396386 H2AFZP0C0S5 128 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 EPHX2P34913 555 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 ITIH3Q06033 890 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 KIF22Q14807 665 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 ARHGAP44Q17R89 818 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 CCDC181Q5TID7 509 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 PHLDB3Q6NSJ2 640 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 SLC39A4Q6P5W5 647 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 H2AFVQ71UI9 128 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.22■□□□□ 0.19
CBX3-202ENST00000396386 CBWD2Q8IUF1 395 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 LNX1Q8TBB1 728 aaPredicted RBP16.22■□□□□ 0.19
CBX3-202ENST00000396386 COG1Q8WTW3 980 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 U2AF1L4Q8WU68 220 aaKnown RBP16.22■□□□□ 0.19
CBX3-202ENST00000396386 POMGNT1Q8WZA1 660 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 SAAL1Q96ER3 474 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 ARHGAP28Q9P2N2 729 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 IGKV6D-21A0A0A0MT36 114 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 TARSL2A2RTX5 802 aaKnown RBP16.22■□□□□ 0.19
CBX3-202ENST00000396386 GRID2IPA4D2P6 1211 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 HNRNPDLO14979 420 aaKnown RBP16.22■□□□□ 0.19
CBX3-202ENST00000396386 FARP2O94887 1054 aaPredicted RBP16.22■□□□□ 0.19
CBX3-202ENST00000396386 SCP2P22307 547 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 MCM3P25205 808 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 C2orf54Q08AI8 447 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 NEDD9Q14511 834 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 LONRF2Q1L5Z9 754 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 WDR93Q6P2C0 686 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 MOB2Q70IA6 237 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 USP37Q86T82 979 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 OLIG1Q8TAK6 271 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 TMC2Q8TDI7 906 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 BICD1Q96G01 975 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
CBX3-202ENST00000396386 USP20Q9Y2K6 914 aa16.22■□□□□ 0.19
CBX3-202ENST00000396386 A0A0A6YYK5 440 aaPredicted RBP16.21■□□□□ 0.19
CBX3-202ENST00000396386 TBC1D8O95759 1140 aa16.21■□□□□ 0.19
CBX3-202ENST00000396386 FTCDO95954 541 aa16.21■□□□□ 0.19
CBX3-202ENST00000396386 ATP4AP20648 1035 aa16.21■□□□□ 0.19
CBX3-202ENST00000396386 GARTP22102 1010 aa16.21■□□□□ 0.19
CBX3-202ENST00000396386 VSNL1P62760 191 aa16.21■□□□□ 0.19
CBX3-202ENST00000396386 BRDTQ58F21 947 aaPredicted RBP16.21■□□□□ 0.19
CBX3-202ENST00000396386 MEI1Q5TIA1 1274 aa16.21■□□□□ 0.19
CBX3-202ENST00000396386 FAM160B1Q5W0V3 765 aa16.21■□□□□ 0.19
CBX3-202ENST00000396386 CCDC70Q6NSX1 233 aa16.21■□□□□ 0.19
CBX3-202ENST00000396386 ARHGEF19Q8IW93 802 aa16.21■□□□□ 0.19
CBX3-202ENST00000396386 SLC30A5Q8TAD4 765 aa16.21■□□□□ 0.19
CBX3-202ENST00000396386 OPTNQ96CV9 577 aa16.21■□□□□ 0.19
CBX3-202ENST00000396386 FBXL18Q96ME1 805 aa16.21■□□□□ 0.19
CBX3-202ENST00000396386 PSMB7Q99436 277 aa16.21■□□□□ 0.19
CBX3-202ENST00000396386 SYT11Q9BT88 431 aa16.21■□□□□ 0.19
CBX3-202ENST00000396386 TMEM117Q9H0C3 514 aa16.21■□□□□ 0.19
CBX3-202ENST00000396386 LRRN2O75325 713 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 OSBPP22059 807 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 RFC5P40937 340 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 PAFAH1B1P43034 410 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 ENPEPQ07075 957 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 FASTKD5Q7L8L6 764 aaKnown RBP16.2■□□□□ 0.18
CBX3-202ENST00000396386 ARMC9Q7Z3E5 817 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 GPD1LQ8N335 351 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 NIFKQ9BYG3 293 aaKnown RBP16.2■□□□□ 0.18
CBX3-202ENST00000396386 DHX33Q9H6R0 707 aaKnown RBP16.2■□□□□ 0.18
CBX3-202ENST00000396386 TMEM8AQ9HCN3 771 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 UBE2TQ9NPD8 197 aaPredicted RBP16.2■□□□□ 0.18
CBX3-202ENST00000396386 RNF14Q9UBS8 474 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 NCANO14594 1321 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 LRRIQ3A6PVS8 624 aaPredicted RBP16.2■□□□□ 0.18
CBX3-202ENST00000396386 TGFB3P10600 412 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 CXCR5P32302 372 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 GTF2H1P32780 548 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 NOP2P46087 812 aaKnown RBP16.2■□□□□ 0.18
CBX3-202ENST00000396386 CYP24A1Q07973 514 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 GLIPR1L2Q4G1C9 344 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 KRT39Q6A163 491 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 TAS1R3Q7RTX0 852 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 GLYCTKQ8IVS8 523 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 MMGT1Q8N4V1 131 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 PARD3BQ8TEW8 1205 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms