RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 HERC6Q8IVU3 1022 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 FAM178BQ8IXR5 827 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 CCDC65Q8IXS2 484 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 GRAMD1CQ8IYS0 662 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 TMEM161BQ8NDZ6 487 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 CNNM3Q8NE01 707 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 TOP1MTQ969P6 601 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 CPB2Q96IY4 423 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 PANK4Q9NVE7 773 aa21.15■□□□□ 0.98
HOXA9-202ENST00000396345 TTC3P53804 2025 aa21.14■□□□□ 0.98
HOXA9-202ENST00000396345 FRMD3A2A2Y4 597 aa21.14■□□□□ 0.97
HOXA9-202ENST00000396345 C9IYK1 514 aa21.14■□□□□ 0.97
HOXA9-202ENST00000396345 B4GALT5O43286 388 aa21.14■□□□□ 0.97
HOXA9-202ENST00000396345 PRPF40AO75400 957 aaKnown RBP21.14■□□□□ 0.97
HOXA9-202ENST00000396345 UPP2O95045 317 aa21.14■□□□□ 0.97
HOXA9-202ENST00000396345 ARF4P18085 180 aaPredicted RBP21.14■□□□□ 0.97
HOXA9-202ENST00000396345 SARSP49591 514 aaKnown RBP21.14■□□□□ 0.97
HOXA9-202ENST00000396345 FAM160A1Q05DH4 1040 aa21.14■□□□□ 0.97
HOXA9-202ENST00000396345 PRPF4BQ13523 1007 aaKnown RBP21.14■□□□□ 0.97
HOXA9-202ENST00000396345 FAM117BQ6P1L5 589 aa21.14■□□□□ 0.97
HOXA9-202ENST00000396345 NOTUMQ6P988 496 aa21.14■□□□□ 0.97
HOXA9-202ENST00000396345 SFR1Q86XK3 245 aa21.14■□□□□ 0.97
HOXA9-202ENST00000396345 FMR1NBQ8N0W7 255 aaPredicted RBP21.14■□□□□ 0.97
HOXA9-202ENST00000396345 ENGASEQ8NFI3 743 aa21.14■□□□□ 0.97
HOXA9-202ENST00000396345 GBP4Q96PP9 640 aa21.14■□□□□ 0.97
HOXA9-202ENST00000396345 BLZF1Q9H2G9 400 aa21.14■□□□□ 0.97
HOXA9-202ENST00000396345 SEL1LQ9UBV2 794 aa21.14■□□□□ 0.97
HOXA9-202ENST00000396345 CNTNAP2Q9UHC6 1331 aa21.13■□□□□ 0.97
HOXA9-202ENST00000396345 K7ENM7 598 aa21.13■□□□□ 0.97
HOXA9-202ENST00000396345 MAPTP10636 758 aaKnown RBP21.13■□□□□ 0.97
HOXA9-202ENST00000396345 CASP1P29466 404 aa21.13■□□□□ 0.97
HOXA9-202ENST00000396345 FAM189BP81408 668 aa21.13■□□□□ 0.97
HOXA9-202ENST00000396345 SNW1Q13573 536 aaKnown RBP21.13■□□□□ 0.97
HOXA9-202ENST00000396345 CUL4BQ13620 913 aa21.13■□□□□ 0.97
HOXA9-202ENST00000396345 TMEM132AQ24JP5 1023 aa21.13■□□□□ 0.97
HOXA9-202ENST00000396345 HERC4Q5GLZ8 1057 aaPredicted RBP21.13■□□□□ 0.97
HOXA9-202ENST00000396345 TAS1R3Q7RTX0 852 aa21.13■□□□□ 0.97
HOXA9-202ENST00000396345 HAUS6Q7Z4H7 955 aa21.13■□□□□ 0.97
HOXA9-202ENST00000396345 SLC17A8Q8NDX2 589 aa21.13■□□□□ 0.97
HOXA9-202ENST00000396345 CCDC51Q96ER9 411 aa21.13■□□□□ 0.97
HOXA9-202ENST00000396345 ZBED2Q9BTP6 218 aa21.13■□□□□ 0.97
HOXA9-202ENST00000396345 RNF216Q9NWF9 866 aaPredicted RBP21.13■□□□□ 0.97
HOXA9-202ENST00000396345 LRFN2Q9ULH4 789 aa21.13■□□□□ 0.97
HOXA9-202ENST00000396345 A0A0U1RQF3 1178 aa21.12■□□□□ 0.97
HOXA9-202ENST00000396345 GJB5O95377 273 aa21.12■□□□□ 0.97
HOXA9-202ENST00000396345 STAG3L1P0CL83 205 aa21.12■□□□□ 0.97
HOXA9-202ENST00000396345 SCP2P22307 547 aa21.12■□□□□ 0.97
HOXA9-202ENST00000396345 NMT1P30419 496 aaKnown RBP21.12■□□□□ 0.97
HOXA9-202ENST00000396345 RABGGTBP53611 331 aa21.12■□□□□ 0.97
HOXA9-202ENST00000396345 UBE2HP62256 183 aa21.12■□□□□ 0.97
HOXA9-202ENST00000396345 SMAD3P84022 425 aaKnown RBP21.12■□□□□ 0.97
HOXA9-202ENST00000396345 STRN3Q13033 797 aa21.12■□□□□ 0.97
HOXA9-202ENST00000396345 NPAS4Q8IUM7 802 aa21.12■□□□□ 0.97
HOXA9-202ENST00000396345 CCDC34Q96HJ3 373 aa21.12■□□□□ 0.97
HOXA9-202ENST00000396345 FIZ1Q96SL8 496 aa21.12■□□□□ 0.97
HOXA9-202ENST00000396345 TRAIPQ9BWF2 469 aa21.12■□□□□ 0.97
HOXA9-202ENST00000396345 MRPL44Q9H9J2 332 aaKnown RBP21.12■□□□□ 0.97
HOXA9-202ENST00000396345 TBC1D7Q9P0N9 293 aa21.12■□□□□ 0.97
HOXA9-202ENST00000396345 USP20Q9Y2K6 914 aa21.12■□□□□ 0.97
HOXA9-202ENST00000396345 PCDHB7Q9Y5E2 793 aa21.12■□□□□ 0.97
HOXA9-202ENST00000396345 A0A1B0GUA9 196 aa21.11■□□□□ 0.97
HOXA9-202ENST00000396345 TTLL13PA6NNM8 815 aa21.11■□□□□ 0.97
HOXA9-202ENST00000396345 GTPBP6O43824 516 aaPredicted RBP21.11■□□□□ 0.97
HOXA9-202ENST00000396345 EDN1P05305 212 aa21.11■□□□□ 0.97
HOXA9-202ENST00000396345 MYL1P05976 194 aa21.11■□□□□ 0.97
HOXA9-202ENST00000396345 SKIP12755 728 aa21.11■□□□□ 0.97
HOXA9-202ENST00000396345 COASYQ13057 564 aa21.11■□□□□ 0.97
HOXA9-202ENST00000396345 NT5DC1Q5TFE4 455 aa21.11■□□□□ 0.97
HOXA9-202ENST00000396345 KANK3Q6NY19 840 aa21.11■□□□□ 0.97
HOXA9-202ENST00000396345 UNC13DQ70J99 1090 aa21.11■□□□□ 0.97
HOXA9-202ENST00000396345 ECHDC2Q86YB7 292 aa21.11■□□□□ 0.97
HOXA9-202ENST00000396345 KCNN1Q92952 543 aa21.11■□□□□ 0.97
HOXA9-202ENST00000396345 MRPL4Q9BYD3 311 aaKnown RBP21.11■□□□□ 0.97
HOXA9-202ENST00000396345 ELAC1Q9H777 363 aaKnown RBP21.11■□□□□ 0.97
HOXA9-202ENST00000396345 OLFML3Q9NRN5 406 aa21.11■□□□□ 0.97
HOXA9-202ENST00000396345 N4BP3O15049 544 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 TLL1O43897 1013 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 NR1I2O75469 434 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 ABCD1P33897 745 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 RAB27AP51159 221 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 UBXN11Q5T124 520 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 ATF7IP2Q5U623 682 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 ZNF720Q7Z2F6 126 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 CDR2LQ86X02 465 aaPredicted RBP21.1■□□□□ 0.97
HOXA9-202ENST00000396345 CRIPAKQ8N1N5 446 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 RAD9AQ99638 391 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 PBX4Q9BYU1 374 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 ST6GALNAC4Q9H4F1 302 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 PDZD7Q9H5P4 517 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 FAM105AQ9NUU6 356 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 TMEM161AQ9NX61 479 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 MSRAQ9UJ68 235 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 TBX20Q9UMR3 447 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 PCDHB2Q9Y5E7 798 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 PCDHA11Q9Y5I1 949 aa21.1■□□□□ 0.97
HOXA9-202ENST00000396345 GBF1Q92538 1859 aa21.09■□□□□ 0.97
HOXA9-202ENST00000396345 PVALEFA0A1B0GWK0 134 aa21.09■□□□□ 0.97
HOXA9-202ENST00000396345 EOMESO95936 686 aa21.09■□□□□ 0.97
HOXA9-202ENST00000396345 PBX2P40425 430 aa21.09■□□□□ 0.97
HOXA9-202ENST00000396345 GTF2BQ00403 316 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 445.8 ms