RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 PDLIM7Q9NR12 457 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 CYP39A1Q9NYL5 469 aa18.2■□□□□ 0.5
NUP50-202ENST00000396096 ADRB2P07550 413 aa18.19■□□□□ 0.5
NUP50-202ENST00000396096 PSAPP07602 524 aa18.19■□□□□ 0.5
NUP50-202ENST00000396096 ADSSP30520 456 aa18.19■□□□□ 0.5
NUP50-202ENST00000396096 MXI1P50539 228 aa18.19■□□□□ 0.5
NUP50-202ENST00000396096 DNA2P51530 1060 aa18.19■□□□□ 0.5
NUP50-202ENST00000396096 HADHBP55084 474 aaKnown RBP18.19■□□□□ 0.5
NUP50-202ENST00000396096 SND1Q7KZF4 910 aaKnown RBP eCLIP18.19■□□□□ 0.5
NUP50-202ENST00000396096 METTL13Q8N6R0 699 aa18.19■□□□□ 0.5
NUP50-202ENST00000396096 ZSWIM2Q8NEG5 633 aa18.19■□□□□ 0.5
NUP50-202ENST00000396096 CTNNBL1Q8WYA6 563 aaPredicted RBP18.19■□□□□ 0.5
NUP50-202ENST00000396096 FBXL18Q96ME1 805 aa18.19■□□□□ 0.5
NUP50-202ENST00000396096 SGIP1Q9BQI5 828 aa18.19■□□□□ 0.5
NUP50-202ENST00000396096 TMEM117Q9H0C3 514 aa18.19■□□□□ 0.5
NUP50-202ENST00000396096 UBE2TQ9NPD8 197 aaPredicted RBP18.19■□□□□ 0.5
NUP50-202ENST00000396096 GABBR1Q9UBS5 961 aa18.19■□□□□ 0.5
NUP50-202ENST00000396096 DOCK5Q9H7D0 1870 aa18.19■□□□□ 0.5
NUP50-202ENST00000396096 ANKRD62A6NC57 917 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 SPATA31C2B4DYI2 1134 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 ANKRD63C9JTQ0 380 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 GLI1P08151 1106 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 GYS2P54840 703 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 EIF1ADQ8N9N8 165 aaKnown RBP18.18■□□□□ 0.5
NUP50-202ENST00000396096 SLC35G2Q8TBE7 412 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 TMC2Q8TDI7 906 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 GOLPH3Q9H4A6 298 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 A1CFQ9NQ94 594 aaKnown RBP18.18■□□□□ 0.5
NUP50-202ENST00000396096 KMT5AQ9NQR1 393 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 TMOD4Q9NZQ9 345 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 COQ4Q9Y3A0 265 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 CCDC169A6NNP5 214 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 AGPSO00116 658 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 PGRMC1O00264 195 aaKnown RBP18.18■□□□□ 0.5
NUP50-202ENST00000396096 DGAT1O75907 488 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 HEXIM1O94992 359 aaKnown RBP18.18■□□□□ 0.5
NUP50-202ENST00000396096 SNRNP35Q16560 246 aaKnown RBP18.18■□□□□ 0.5
NUP50-202ENST00000396096 SH3D19Q5HYK7 790 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 DAAM2Q86T65 1068 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 MCPH1Q8NEM0 835 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 TRPM4Q8TD43 1214 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 BSNDQ8WZ55 320 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 CEP170P1Q96L14 293 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 GDAP1L1Q96MZ0 367 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 KRT12Q99456 494 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.18■□□□□ 0.57e-6■□□□□ 9.4
NUP50-202ENST00000396096 JPH1Q9HDC5 661 aaPredicted RBP18.18■□□□□ 0.5
NUP50-202ENST00000396096 HOXC10Q9NYD6 342 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 SLC9A2Q9UBY0 812 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 PPP1R1BQ9UD71 204 aaPredicted RBP18.18■□□□□ 0.5
NUP50-202ENST00000396096 ZHX1Q9UKY1 873 aaPredicted RBP18.18■□□□□ 0.5
NUP50-202ENST00000396096 TTC7AQ9ULT0 858 aaPredicted RBP18.18■□□□□ 0.5
NUP50-202ENST00000396096 AFG3L2Q9Y4W6 797 aa18.18■□□□□ 0.5
NUP50-202ENST00000396096 GOLGB1Q14789 3259 aaKnown RBP18.17■□□□□ 0.5
NUP50-202ENST00000396096 DENND3A2RUS2 1198 aa18.17■□□□□ 0.5
NUP50-202ENST00000396096 BHMG1C9JSJ3 638 aaPredicted RBP18.17■□□□□ 0.5
NUP50-202ENST00000396096 RNF40O75150 1001 aa18.17■□□□□ 0.5
NUP50-202ENST00000396096 CNGA1P29973 690 aa18.17■□□□□ 0.5
NUP50-202ENST00000396096 ABCD1P33897 745 aa18.17■□□□□ 0.5
NUP50-202ENST00000396096 MRPS25P82663 173 aaKnown RBP18.17■□□□□ 0.5
NUP50-202ENST00000396096 PAK2Q13177 524 aa18.17■□□□□ 0.5
NUP50-202ENST00000396096 PRAMEF18Q5VWM3 479 aa18.17■□□□□ 0.5
NUP50-202ENST00000396096 ABHD15Q6UXT9 468 aa18.17■□□□□ 0.5
NUP50-202ENST00000396096 CCDC125Q86Z20 511 aa18.17■□□□□ 0.5
NUP50-202ENST00000396096 CBWD2Q8IUF1 395 aa18.17■□□□□ 0.5
NUP50-202ENST00000396096 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.17■□□□□ 0.5
NUP50-202ENST00000396096 KCNN1Q92952 543 aa18.17■□□□□ 0.5
NUP50-202ENST00000396096 MFSD14AQ96MC6 490 aa18.17■□□□□ 0.5
NUP50-202ENST00000396096 ISCUQ9H1K1 167 aa18.17■□□□□ 0.5
NUP50-202ENST00000396096 GPRC5DQ9NZD1 345 aa18.17■□□□□ 0.5
NUP50-202ENST00000396096 AMFRQ9UKV5 643 aa18.17■□□□□ 0.5
NUP50-202ENST00000396096 DIS3Q9Y2L1 958 aaKnown RBP18.17■□□□□ 0.5
NUP50-202ENST00000396096 PFASO15067 1338 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 IGSF9BQ9UPX0 1349 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 DICER1Q9UPY3 1922 aaKnown RBP18.16■□□□□ 0.5
NUP50-202ENST00000396096 GOLGA6BA6NDN3 693 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 SPDYE16A6NNV3 312 aaPredicted RBP18.16■□□□□ 0.5
NUP50-202ENST00000396096 CCDC188H7C350 402 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 CEP104O60308 925 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 BUB1BO60566 1050 aaPredicted RBP18.16■□□□□ 0.5
NUP50-202ENST00000396096 LRRN2O75325 713 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 GTF2H1P32780 548 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 GGCXP38435 758 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 GNPTABQ3T906 1256 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 ALS2CLQ60I27 953 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 SLC39A4Q6P5W5 647 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 FAM71AQ8IYT1 594 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 PARD3BQ8TEW8 1205 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 TMEM8AQ9HCN3 771 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 OSGEPQ9NPF4 335 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 A0A0G2JMZ2 1700 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 MYH9P35579 1960 aaKnown RBP18.16■□□□□ 0.5
NUP50-202ENST00000396096 ICAM3P32942 547 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 ACTR2P61160 394 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 KRT39Q6A163 491 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 SWSAP1Q6NVH7 229 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 PALB2Q86YC2 1186 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 RHOT2Q8IXI1 618 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 MREGQ8N565 214 aa18.16■□□□□ 0.5
NUP50-202ENST00000396096 ARHGEF26Q96DR7 871 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms