RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 LRRC37A2A6NM11 1700 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 IQCA1LA6NCM1 817 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 P4HA2O15460 535 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 KLRC1P26715 233 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 MXI1P50539 228 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 NAB2Q15742 525 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 ARHGAP44Q17R89 818 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 C1orf220Q5T0J3 134 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 GPAT2Q6NUI2 795 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 POMGNT1Q8WZA1 660 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 TMEM143Q96AN5 459 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 PARD6BQ9BYG5 372 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 SNX12Q9UMY4 172 aa13.19□□□□□ -0.3
ITGB1-202ENST00000396033 GSTTP1A0A1W2PQM5 241 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 H0YCG3 227 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 RFX1P22670 979 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 GJA5P36382 358 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 SNAPC2Q13487 334 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 GPR162Q16538 588 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 SLC39A4Q6P5W5 647 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 TMCO3Q6UWJ1 677 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 ZBTB9Q96C00 473 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 ZNF408Q9H9D4 720 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 NAGPAQ9UK23 515 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 IGKV6D-21A0A0A0MT36 114 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 ZNF185O15231 689 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 TGFB3P10600 412 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 PLA2G4AP47712 749 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 SLC20A2Q08357 652 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 LY6KQ17RY6 165 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 FAM160B1Q5W0V3 765 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 PHLDB3Q6NSJ2 640 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 ALKBH5Q6P6C2 394 aaKnown RBP13.18□□□□□ -0.3
ITGB1-202ENST00000396033 FMNL3Q8IVF7 1028 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 LMO3Q8TAP4 145 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 SLC7A3Q8WY07 619 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 MMS19Q96T76 1030 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 ARHGAP28Q9P2N2 729 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 CYP2C19P33261 490 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 HNRNPH2P55795 449 aaKnown RBP13.18□□□□□ -0.3
ITGB1-202ENST00000396033 EPC2Q52LR7 807 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 METTL7BQ6UX53 244 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 CCDC127Q96BQ5 260 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 PCYT2Q99447 389 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 GPR88Q9GZN0 384 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 CLEC11AQ9Y240 323 aa13.18□□□□□ -0.3
ITGB1-202ENST00000396033 LRRN2O75325 713 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 RHOXF2BP0C7M4 288 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 TAF3Q5VWG9 929 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 NOA1Q8NC60 698 aaKnown RBP13.17□□□□□ -0.3
ITGB1-202ENST00000396033 FGD4Q96M96 766 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 RHOXF2Q9BQY4 288 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 TMEM117Q9H0C3 514 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 DHX33Q9H6R0 707 aaKnown RBP13.17□□□□□ -0.3
ITGB1-202ENST00000396033 ANKZF1Q9H8Y5 726 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 HYOU1Q9Y4L1 999 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 ZC3H4Q9UPT8 1303 aaKnown RBP13.17□□□□□ -0.3
ITGB1-202ENST00000396033 CCDC172P0C7W6 258 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 ABCD1P33897 745 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 TCF7P36402 384 aaPredicted RBP13.17□□□□□ -0.3
ITGB1-202ENST00000396033 STAT5BP51692 787 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 BMS1Q14692 1282 aaKnown RBP13.17□□□□□ -0.3
ITGB1-202ENST00000396033 LDLRAD1Q5T700 205 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.17□□□□□ -0.3
ITGB1-202ENST00000396033 TAS1R3Q7RTX0 852 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 SLC10A4Q96EP9 437 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 UBE2TQ9NPD8 197 aaPredicted RBP13.17□□□□□ -0.3
ITGB1-202ENST00000396033 NCK2O43639 380 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 PALMO75781 387 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 BRDTQ58F21 947 aaPredicted RBP13.17□□□□□ -0.3
ITGB1-202ENST00000396033 NFRKBQ6P4R8 1299 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 ARHGEF19Q8IW93 802 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 KRT222Q8N1A0 295 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 ASAP3Q8TDY4 903 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 U2AF1L4Q8WU68 220 aaKnown RBP13.17□□□□□ -0.3
ITGB1-202ENST00000396033 SEPT1Q8WYJ6 367 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 NIFKQ9BYG3 293 aaKnown RBP13.17□□□□□ -0.3
ITGB1-202ENST00000396033 PORCNQ9H237 461 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 NRBP2Q9NSY0 501 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 KCNG1Q9UIX4 513 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 MYH10P35580 1976 aa13.17□□□□□ -0.3
ITGB1-202ENST00000396033 SCN4AP35499 1836 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 LRRIQ4A6NIV6 560 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 DDX3XO00571 662 aaKnown RBP eCLIP13.16□□□□□ -0.37e-13■■■■□ 24.7
ITGB1-202ENST00000396033 ARIH2O95376 493 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 LIG4P49917 911 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 ERVK-9P63128 1117 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 STRN3Q13033 797 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 PNMA8AQ86V59 439 aaPredicted RBP13.16□□□□□ -0.3
ITGB1-202ENST00000396033 DNAAF5Q86Y56 855 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 DEPTORQ8TB45 409 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 PSMB7Q99436 277 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 MROH8Q9H579 483 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 AZI2Q9H6S1 392 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 GARTP22102 1010 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 GLRA2P23416 452 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 MAP2K1Q02750 393 aaPredicted RBP13.16□□□□□ -0.3
ITGB1-202ENST00000396033 FBXO16Q8IX29 292 aaPredicted RBP13.16□□□□□ -0.3
ITGB1-202ENST00000396033 GPD1LQ8N335 351 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 RPGRIP1Q96KN7 1286 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms