RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 CAPSQ13938 189 aa20.09■□□□□ 0.81
CXCL12-204ENST00000395793 SMC1AQ14683 1233 aaKnown RBP20.09■□□□□ 0.81
CXCL12-204ENST00000395793 CBX2Q14781 532 aaPredicted RBP20.09■□□□□ 0.81
CXCL12-204ENST00000395793 HERC4Q5GLZ8 1057 aaPredicted RBP20.09■□□□□ 0.81
CXCL12-204ENST00000395793 SMG8Q8ND04 991 aaKnown RBP20.09■□□□□ 0.81
CXCL12-204ENST00000395793 TMEM169Q96HH4 297 aa20.09■□□□□ 0.81
CXCL12-204ENST00000395793 IGSF21Q96ID5 467 aa20.09■□□□□ 0.81
CXCL12-204ENST00000395793 GBP3Q9H0R5 595 aa20.09■□□□□ 0.81
CXCL12-204ENST00000395793 ANKEF1Q9NU02 776 aa20.09■□□□□ 0.81
CXCL12-204ENST00000395793 HCFC2Q9Y5Z7 792 aa20.09■□□□□ 0.81
CXCL12-204ENST00000395793 TDRD15B5MCY1 1934 aaKnown RBP20.09■□□□□ 0.81
CXCL12-204ENST00000395793 ASAP2O43150 1006 aa20.08■□□□□ 0.81
CXCL12-204ENST00000395793 EIF5BO60841 1220 aaKnown RBP20.08■□□□□ 0.81
CXCL12-204ENST00000395793 CLASP2O75122 1294 aaKnown RBP20.08■□□□□ 0.81
CXCL12-204ENST00000395793 SPATA31C1P0DKV0 1188 aa20.08■□□□□ 0.81
CXCL12-204ENST00000395793 ARL2P36404 184 aa20.08■□□□□ 0.81
CXCL12-204ENST00000395793 PLA2G5P39877 138 aa20.08■□□□□ 0.81
CXCL12-204ENST00000395793 AMHR2Q16671 573 aa20.08■□□□□ 0.81
CXCL12-204ENST00000395793 C8orf34Q49A92 452 aa20.08■□□□□ 0.81
CXCL12-204ENST00000395793 IFNLR1Q8IU57 520 aaPredicted RBP20.08■□□□□ 0.81
CXCL12-204ENST00000395793 VPS52Q8N1B4 723 aa20.08■□□□□ 0.81
CXCL12-204ENST00000395793 RSPH1Q8WYR4 309 aa20.08■□□□□ 0.81
CXCL12-204ENST00000395793 PGBD4Q96DM1 585 aa20.08■□□□□ 0.81
CXCL12-204ENST00000395793 CPB2Q96IY4 423 aa20.08■□□□□ 0.81
CXCL12-204ENST00000395793 PHF7Q9BWX1 381 aaPredicted RBP20.08■□□□□ 0.81
CXCL12-204ENST00000395793 EIF2AQ9BY44 585 aaKnown RBP20.08■□□□□ 0.81
CXCL12-204ENST00000395793 RSAD1Q9HA92 442 aa20.08■□□□□ 0.81
CXCL12-204ENST00000395793 ZNF318Q5VUA4 2279 aa20.07■□□□□ 0.8
CXCL12-204ENST00000395793 MED24O75448 989 aa20.07■□□□□ 0.8
CXCL12-204ENST00000395793 GLRA2P23416 452 aa20.07■□□□□ 0.8
CXCL12-204ENST00000395793 MBTD1Q05BQ5 628 aa20.07■□□□□ 0.8
CXCL12-204ENST00000395793 C8orf76Q96K31 380 aa20.07■□□□□ 0.8
CXCL12-204ENST00000395793 RNF39Q9H2S5 420 aa20.07■□□□□ 0.8
CXCL12-204ENST00000395793 HCN4Q9Y3Q4 1203 aa20.07■□□□□ 0.8
CXCL12-204ENST00000395793 USO1O60763 962 aaKnown RBP20.06■□□□□ 0.8
CXCL12-204ENST00000395793 DGAT1O75907 488 aa20.06■□□□□ 0.8
CXCL12-204ENST00000395793 TRIOO75962 3097 aa20.06■□□□□ 0.8
CXCL12-204ENST00000395793 ERLIN2O94905 339 aa20.06■□□□□ 0.8
CXCL12-204ENST00000395793 CXCL14O95715 111 aa20.06■□□□□ 0.8
CXCL12-204ENST00000395793 NCLP19338 710 aaKnown RBP20.06■□□□□ 0.8
CXCL12-204ENST00000395793 RNASELQ05823 741 aaKnown RBP20.06■□□□□ 0.8
CXCL12-204ENST00000395793 MXD4Q14582 209 aaPredicted RBP20.06■□□□□ 0.8
CXCL12-204ENST00000395793 DDX53Q86TM3 631 aaKnown RBP20.06■□□□□ 0.8
CXCL12-204ENST00000395793 RPGRIP1Q96KN7 1286 aa20.06■□□□□ 0.8
CXCL12-204ENST00000395793 LLPHQ9BRT6 129 aaKnown RBP20.06■□□□□ 0.8
CXCL12-204ENST00000395793 POLR3FQ9H1D9 316 aaPredicted RBP20.06■□□□□ 0.8
CXCL12-204ENST00000395793 GPRC5CQ9NQ84 441 aa20.06■□□□□ 0.8
CXCL12-204ENST00000395793 IPPQ9Y573 584 aa20.06■□□□□ 0.8
CXCL12-204ENST00000395793 CNTNAP2Q9UHC6 1331 aa20.05■□□□□ 0.8
CXCL12-204ENST00000395793 MUC6Q6W4X9 2439 aa20.05■□□□□ 0.8
CXCL12-204ENST00000395793 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.05■□□□□ 0.8
CXCL12-204ENST00000395793 INO80B-WBP1J3KQ70 363 aa20.05■□□□□ 0.8
CXCL12-204ENST00000395793 B4GALT5O43286 388 aa20.05■□□□□ 0.8
CXCL12-204ENST00000395793 CTSAP10619 480 aa20.05■□□□□ 0.8
CXCL12-204ENST00000395793 CA8P35219 290 aa20.05■□□□□ 0.8
CXCL12-204ENST00000395793 ZNF174Q15697 407 aa20.05■□□□□ 0.8
CXCL12-204ENST00000395793 CATSPER3Q86XQ3 398 aa20.05■□□□□ 0.8
CXCL12-204ENST00000395793 FEZF2Q8TBJ5 459 aa20.05■□□□□ 0.8
CXCL12-204ENST00000395793 CASP10Q92851 521 aa20.05■□□□□ 0.8
CXCL12-204ENST00000395793 HES2Q9Y543 173 aa20.05■□□□□ 0.8
CXCL12-204ENST00000395793 IRAK3Q9Y616 596 aa20.05■□□□□ 0.8
CXCL12-204ENST00000395793 DENND4AQ7Z401 1863 aa20.05■□□□□ 0.8
CXCL12-204ENST00000395793 POMCP01189 267 aa20.04■□□□□ 0.8
CXCL12-204ENST00000395793 SRGAP2BP0DMP2 458 aa20.04■□□□□ 0.8
CXCL12-204ENST00000395793 ARF4P18085 180 aaPredicted RBP20.04■□□□□ 0.8
CXCL12-204ENST00000395793 POU5F1BQ06416 359 aa20.04■□□□□ 0.8
CXCL12-204ENST00000395793 NBR1Q14596 966 aa20.04■□□□□ 0.8
CXCL12-204ENST00000395793 SAFBQ15424 915 aaKnown RBP eCLIP20.04■□□□□ 0.8
CXCL12-204ENST00000395793 HFE2Q6ZVN8 426 aa20.04■□□□□ 0.8
CXCL12-204ENST00000395793 MAEAQ7L5Y9 396 aa20.04■□□□□ 0.8
CXCL12-204ENST00000395793 CDR2LQ86X02 465 aaPredicted RBP20.04■□□□□ 0.8
CXCL12-204ENST00000395793 FBXO18Q8NFZ0 1043 aa20.04■□□□□ 0.8
CXCL12-204ENST00000395793 URGCPQ8TCY9 931 aa20.04■□□□□ 0.8
CXCL12-204ENST00000395793 TUFT1Q9NNX1 390 aa20.04■□□□□ 0.8
CXCL12-204ENST00000395793 PLXNA3P51805 1871 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 INPPL1O15357 1258 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 OR52Z1P0C646 297 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 ITGA4P13612 1032 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 EPCAMP16422 314 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 HOXB8P17481 243 aaPredicted RBP20.03■□□□□ 0.8
CXCL12-204ENST00000395793 AXLP30530 894 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 TFDP1Q14186 410 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 PTPN14Q15678 1187 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 KANK3Q6NY19 840 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 NOTUMQ6P988 496 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 POTEGQ6S5H5 508 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 SLC22A17Q8WUG5 538 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 FAM122AQ96E09 287 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 CCDC43Q96MW1 224 aaKnown RBP20.03■□□□□ 0.8
CXCL12-204ENST00000395793 GAD1Q99259 594 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 TMEM175Q9BSA9 504 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 NFKBIZQ9BYH8 718 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 CSRNP2Q9H175 543 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 FOXP1Q9H334 677 aaPredicted RBP20.03■□□□□ 0.8
CXCL12-204ENST00000395793 NXF3Q9H4D5 531 aaKnown RBP20.03■□□□□ 0.8
CXCL12-204ENST00000395793 MARCH5Q9NX47 278 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 MIOSQ9NXC5 875 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 ARIH1Q9Y4X5 557 aaPredicted RBP20.03■□□□□ 0.8
CXCL12-204ENST00000395793 C2orf16Q68DN1 1984 aa20.03■□□□□ 0.8
CXCL12-204ENST00000395793 NRP1O14786 923 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms