RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 BTBD6Q96KE9 485 aa22.27■■□□□ 1.16
CLK3-202ENST00000395066 NACC1Q96RE7 527 aa22.27■■□□□ 1.16
CLK3-202ENST00000395066 AGPAT1Q99943 283 aa22.27■■□□□ 1.16
CLK3-202ENST00000395066 MKNK1Q9BUB5 465 aa22.27■■□□□ 1.16
CLK3-202ENST00000395066 OSBPL7Q9BZF2 842 aa22.27■■□□□ 1.16
CLK3-202ENST00000395066 ARHGEF35A5YM69 484 aa22.27■■□□□ 1.16
CLK3-202ENST00000395066 FTLP02792 175 aaPredicted RBP22.27■■□□□ 1.16
CLK3-202ENST00000395066 CDR1P51861 262 aa22.27■■□□□ 1.16
CLK3-202ENST00000395066 RAPGEF5Q92565 580 aa22.27■■□□□ 1.16
CLK3-202ENST00000395066 FAM114A2Q9NRY5 505 aa22.27■■□□□ 1.16
CLK3-202ENST00000395066 RBBP6Q7Z6E9 1792 aaKnown RBP22.27■■□□□ 1.16
CLK3-202ENST00000395066 FBXO25Q8TCJ0 367 aa22.27■■□□□ 1.15
CLK3-202ENST00000395066 SEC16BQ96JE7 1060 aa22.27■■□□□ 1.15
CLK3-202ENST00000395066 GLIS2Q9BZE0 524 aaPredicted RBP22.27■■□□□ 1.15
CLK3-202ENST00000395066 EPB41L4BQ9H329 900 aa22.27■■□□□ 1.15
CLK3-202ENST00000395066 PNMA2Q9UL42 364 aa22.27■■□□□ 1.15
CLK3-202ENST00000395066 TLDC2A0PJX2 215 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 ANKRD62A6NC57 917 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 PHF20L1A8MW92 1017 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 ZDHHC18Q9NUE0 388 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 DAAM1Q9Y4D1 1078 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 TCRBV7S2A1N4TA0A589 114 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 IPO5O00410 1097 aaKnown RBP22.26■■□□□ 1.15
CLK3-202ENST00000395066 PAEPP09466 180 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 CCDC172P0C7W6 258 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 VCAM1P19320 739 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 PDE6BP35913 854 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 GRIPAP1Q4V328 841 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 DUPD1Q68J44 220 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 JAMLQ86YT9 394 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 RPUSD2Q8IZ73 545 aaKnown RBP22.26■■□□□ 1.15
CLK3-202ENST00000395066 PLEKHO2Q8TD55 490 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 ERP44Q9BS26 406 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 CARD9Q9H257 536 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 SERPINA10Q9UK55 444 aa22.26■■□□□ 1.15
CLK3-202ENST00000395066 GOLGA8IPA6NC78 632 aa22.25■■□□□ 1.15
CLK3-202ENST00000395066 C5orf60A6NFR6 353 aa22.25■■□□□ 1.15
CLK3-202ENST00000395066 GOLGA8JA6NMD2 632 aa22.25■■□□□ 1.15
CLK3-202ENST00000395066 CHRNA5P30532 468 aa22.25■■□□□ 1.15
CLK3-202ENST00000395066 MESDQ14696 234 aa22.25■■□□□ 1.15
CLK3-202ENST00000395066 KIF22Q14807 665 aa22.25■■□□□ 1.15
CLK3-202ENST00000395066 PADI6Q6TGC4 694 aa22.25■■□□□ 1.15
CLK3-202ENST00000395066 CACNA2D3Q8IZS8 1091 aa22.25■■□□□ 1.15
CLK3-202ENST00000395066 PCDHB18PQ96TA0 734 aa22.25■■□□□ 1.15
CLK3-202ENST00000395066 TTC7AQ9ULT0 858 aaPredicted RBP22.25■■□□□ 1.15
CLK3-202ENST00000395066 DNM1LO00429 736 aa22.25■■□□□ 1.15
CLK3-202ENST00000395066 ATP2C2O75185 946 aa22.25■■□□□ 1.15
CLK3-202ENST00000395066 NFIL3Q16649 462 aa22.25■■□□□ 1.15
CLK3-202ENST00000395066 ANKRD20A8PQ5CZ79 823 aa22.25■■□□□ 1.15
CLK3-202ENST00000395066 RPAINQ86UA6 219 aa22.25■■□□□ 1.15
CLK3-202ENST00000395066 ATP8B3O60423 1300 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 PPFIA2O75334 1257 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 SGPL1O95470 568 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 ITGB5P18084 799 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 PPP2R5AQ15172 486 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 TTC27Q6P3X3 843 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 ZDHHC24Q6UX98 284 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 IL31RAQ8NI17 732 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 TXLNGYQ9BZA5 131 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 RAB17Q9H0T7 212 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 VIL1P09327 827 aaKnown RBP22.24■■□□□ 1.15
CLK3-202ENST00000395066 MIGA2Q7L4E1 593 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 ARMC9Q7Z3E5 817 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 NLGN1Q8N2Q7 840 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 RNF25Q96BH1 459 aaPredicted RBP22.24■■□□□ 1.15
CLK3-202ENST00000395066 PSMD1Q99460 953 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 TEKT3Q9BXF9 490 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 GPRC5CQ9NQ84 441 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 SEL1LQ9UBV2 794 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 PTPN22Q9Y2R2 807 aa22.24■■□□□ 1.15
CLK3-202ENST00000395066 GOLGA6L10A0A0M3HER8 536 aa22.23■■□□□ 1.15
CLK3-202ENST00000395066 BYSLQ13895 437 aaKnown RBP22.23■■□□□ 1.15
CLK3-202ENST00000395066 C1orf220Q5T0J3 134 aa22.23■■□□□ 1.15
CLK3-202ENST00000395066 STXBP4Q6ZWJ1 553 aa22.23■■□□□ 1.15
CLK3-202ENST00000395066 PRELID2Q8N945 189 aa22.23■■□□□ 1.15
CLK3-202ENST00000395066 TATDN2Q93075 761 aa22.23■■□□□ 1.15
CLK3-202ENST00000395066 WDR11Q9BZH6 1224 aa22.23■■□□□ 1.15
CLK3-202ENST00000395066 ODF2LQ9ULJ1 636 aa22.23■■□□□ 1.15
CLK3-202ENST00000395066 SCAF8Q9UPN6 1271 aaKnown RBP22.23■■□□□ 1.15
CLK3-202ENST00000395066 ONECUT3O60422 494 aaPredicted RBP22.23■■□□□ 1.15
CLK3-202ENST00000395066 CALCAP01258 141 aa22.23■■□□□ 1.15
CLK3-202ENST00000395066 COMTP21964 271 aa22.23■■□□□ 1.15
CLK3-202ENST00000395066 CYB5D1Q6P9G0 228 aa22.23■■□□□ 1.15
CLK3-202ENST00000395066 FAM84AQ96KN4 292 aa22.23■■□□□ 1.15
CLK3-202ENST00000395066 AGBL1Q96MI9 1066 aa22.23■■□□□ 1.15
CLK3-202ENST00000395066 MRIQ9BWK5 157 aa22.23■■□□□ 1.15
CLK3-202ENST00000395066 ARHGEF10LQ9HCE6 1279 aa22.23■■□□□ 1.15
CLK3-202ENST00000395066 UTRNP46939 3433 aa22.22■■□□□ 1.15
CLK3-202ENST00000395066 ANKRD63C9JTQ0 380 aa22.22■■□□□ 1.15
CLK3-202ENST00000395066 KIAA0391O15091 583 aaKnown RBP22.22■■□□□ 1.15
CLK3-202ENST00000395066 RPL21P46778 160 aaKnown RBP22.22■■□□□ 1.15
CLK3-202ENST00000395066 VAMP7P51809 220 aa22.22■■□□□ 1.15
CLK3-202ENST00000395066 PREPLQ4J6C6 727 aaPredicted RBP22.22■■□□□ 1.15
CLK3-202ENST00000395066 FUKQ8N0W3 1084 aa22.22■■□□□ 1.15
CLK3-202ENST00000395066 TACO1Q9BSH4 297 aaKnown RBP22.22■■□□□ 1.15
CLK3-202ENST00000395066 STRA6Q9BX79 667 aa22.22■■□□□ 1.15
CLK3-202ENST00000395066 COL20A1Q9P218 1284 aa22.22■■□□□ 1.15
CLK3-202ENST00000395066 ATRNL1Q5VV63 1379 aa22.22■■□□□ 1.15
CLK3-202ENST00000395066 SLCO1A2P46721 670 aa22.22■■□□□ 1.15
CLK3-202ENST00000395066 PMS2P54278 862 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms