RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 MIF4GDA9UHW6 222 aaKnown RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 HNRNPCL2B2RXH8 293 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 HNRNPCL1O60812 293 aaKnown RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 CAPRIN1Q14444 709 aaKnown RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 TAF1CQ15572 869 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 NAALADL2Q58DX5 795 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 HEATR6Q6AI08 1181 aaKnown RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 TTC39CQ8N584 583 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 NFU1Q9UMS0 254 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 DFFAO00273 331 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 SMARCA1P28370 1054 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 RNF168Q8IYW5 571 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 SH3KBP1Q96B97 665 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 ANLNQ9NQW6 1124 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 ZNF212Q9UDV6 495 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 AFF4Q9UHB7 1163 aaKnown RBP11.06□□□□□ -0.64
COL4A6-203ENST00000394872 PCDHA10Q9Y5I2 948 aa11.06□□□□□ -0.64
COL4A6-203ENST00000394872 TDP2O95551 362 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 ESRRGP62508 458 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 TMPRSS15P98073 1019 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 SPATA2LQ8IUW3 424 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-203ENST00000394872 PBXIP1Q96AQ6 731 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 ISCA1Q9BUE6 129 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 PARD6BQ9BYG5 372 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 UPF3AQ9H1J1 476 aaKnown RBP11.05□□□□□ -0.64
COL4A6-203ENST00000394872 VPS11Q9H270 941 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 YWHABP31946 246 aaKnown RBP11.05□□□□□ -0.64
COL4A6-203ENST00000394872 KCNA1Q09470 495 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 ANO4Q32M45 955 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 FAM102AQ5T9C2 384 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-203ENST00000394872 TAS2R42Q7RTR8 314 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 ZNF467Q7Z7K2 595 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-203ENST00000394872 LCA5Q86VQ0 697 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 RNF149Q8NC42 400 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 INTUQ9ULD6 942 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 KDM6BO15054 1643 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 NR1D1P20393 614 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 CDC27P30260 824 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 NUDT18Q6ZVK8 323 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 HACL1Q9UJ83 578 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 TET3O43151 1660 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 GSG1L2A8MUP6 293 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 CCDC188H7C350 402 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 USP11P51784 963 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 PTK2BQ14289 1009 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 DRAP1Q14919 205 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-203ENST00000394872 MB21D2Q8IYB1 491 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-203ENST00000394872 EGFL8Q99944 293 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 TRIM62Q9BVG3 475 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 DHX35Q9H5Z1 703 aaKnown RBP11.05□□□□□ -0.64
COL4A6-203ENST00000394872 ABHD10Q9NUJ1 306 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 NDFIP2Q9NV92 336 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 SNX24Q9Y343 169 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 H3BRJ5 948 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 PRR29P0C7W0 189 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 RCAN1P53805 252 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 COPS2P61201 443 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 DUOXA2Q1HG44 320 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 RBM46Q8TBY0 533 aaKnown RBP11.05□□□□□ -0.64
COL4A6-203ENST00000394872 FBXO41Q8TF61 875 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 DDX50Q9BQ39 737 aaKnown RBP11.05□□□□□ -0.64
COL4A6-203ENST00000394872 TTC7AQ9ULT0 858 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-203ENST00000394872 ADCY10Q96PN6 1610 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 KPNA7A9QM74 516 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 MAPK13O15264 365 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 MYBL1P10243 752 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 STAT5BP51692 787 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 MRPS25P82663 173 aaKnown RBP11.05□□□□□ -0.64
COL4A6-203ENST00000394872 ROR1Q01973 937 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 POU5F1BQ06416 359 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 RAD51Q06609 339 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 R3HDM1Q15032 1099 aaKnown RBP11.05□□□□□ -0.64
COL4A6-203ENST00000394872 ITPRIPL1Q6GPH6 555 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 KRT80Q6KB66 452 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 DDX53Q86TM3 631 aaKnown RBP11.05□□□□□ -0.64
COL4A6-203ENST00000394872 TRIM59Q8IWR1 403 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 LBHD1Q9BQE6 289 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-203ENST00000394872 TJP2Q9UDY2 1190 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 ANGPTL2Q9UKU9 493 aa11.05□□□□□ -0.64
COL4A6-203ENST00000394872 KRT38O76015 456 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 PRKCBP05771 671 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 KCNA4P22459 653 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 UBA6A0AVT1 1052 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-203ENST00000394872 KRT7P08729 469 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 RPSAP08865 295 aaKnown RBP11.04□□□□□ -0.64
COL4A6-203ENST00000394872 AP3M2P53677 418 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 FOXO4P98177 505 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 SNAPC2Q13487 334 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 LBRQ14739 615 aaKnown RBP11.04□□□□□ -0.64
COL4A6-203ENST00000394872 COG2Q14746 738 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 ZNF746Q6NUN9 644 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-203ENST00000394872 DDX56Q9NY93 547 aaKnown RBP11.04□□□□□ -0.64
COL4A6-203ENST00000394872 PLAAQ9Y263 795 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 L3MBTL1Q9Y468 752 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 FRMD3A2A2Y4 597 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 SRGAP2O75044 1071 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 ALX1Q15699 326 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 TBCCQ15814 346 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 RBBP7Q16576 425 aa11.04□□□□□ -0.64
COL4A6-203ENST00000394872 TBC1D16Q8TBP0 767 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms