RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 HDAC7Q8WUI4 952 aa16.37■□□□□ 0.21
GPC3-202ENST00000394299 KIFAP3Q92845 792 aa16.37■□□□□ 0.21
GPC3-202ENST00000394299 PCYT2Q99447 389 aa16.37■□□□□ 0.21
GPC3-202ENST00000394299 NTPCRQ9BSD7 190 aaKnown RBP16.37■□□□□ 0.21
GPC3-202ENST00000394299 NENFQ9UMX5 172 aa16.37■□□□□ 0.21
GPC3-202ENST00000394299 HYOU1Q9Y4L1 999 aa16.37■□□□□ 0.21
GPC3-202ENST00000394299 WDR81Q562E7 1941 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 GSTTP1A0A1W2PQM5 241 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 CCDC151A5D8V7 595 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 PPATQ06203 517 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 EPC2Q52LR7 807 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 ERO1BQ86YB8 467 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 SLC20A1Q8WUM9 679 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 POMGNT1Q8WZA1 660 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 LUC7LQ9NQ29 371 aaKnown RBP16.36■□□□□ 0.21
GPC3-202ENST00000394299 RBPJLQ9UBG7 517 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 STAM2O75886 525 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 BRD3Q15059 726 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 KCTD19Q17RG1 926 aaPredicted RBP16.36■□□□□ 0.21
GPC3-202ENST00000394299 EAPPQ56P03 285 aaPredicted RBP16.36■□□□□ 0.21
GPC3-202ENST00000394299 XKR3Q5GH77 459 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 ANKRD13AQ8IZ07 590 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 SLC30A5Q8TAD4 765 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 ATP6V0A4Q9HBG4 840 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 SEPT11Q9NVA2 429 aaKnown RBP16.36■□□□□ 0.21
GPC3-202ENST00000394299 MAFBQ9Y5Q3 323 aaPredicted RBP16.36■□□□□ 0.21
GPC3-202ENST00000394299 PTPRFP10586 1907 aa16.36■□□□□ 0.21
GPC3-202ENST00000394299 LRRIQ3A6PVS8 624 aaPredicted RBP16.35■□□□□ 0.21
GPC3-202ENST00000394299 ATG7O95352 703 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 ARIH2O95376 493 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 ICAM3P32942 547 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 USP8P40818 1118 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 POLGP54098 1239 aaPredicted RBP16.35■□□□□ 0.21
GPC3-202ENST00000394299 GALCP54803 685 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 CKAP4Q07065 602 aaKnown RBP16.35■□□□□ 0.21
GPC3-202ENST00000394299 EMC2Q15006 297 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 WDR78Q5VTH9 848 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 GSPT2Q8IYD1 628 aaKnown RBP16.35■□□□□ 0.21
GPC3-202ENST00000394299 SPATA4Q8NEY3 305 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 ASAP3Q8TDY4 903 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 PARD3BQ8TEW8 1205 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 SPIRE2Q8WWL2 714 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 OPTNQ96CV9 577 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 PLEKHA4Q9H4M7 779 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 PCDHGC5Q9Y5F6 944 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 IGSF9BQ9UPX0 1349 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 HNRNPDLO14979 420 aaKnown RBP16.35■□□□□ 0.21
GPC3-202ENST00000394299 FARP2O94887 1054 aaPredicted RBP16.35■□□□□ 0.21
GPC3-202ENST00000394299 DLATP10515 647 aaKnown RBP16.35■□□□□ 0.21
GPC3-202ENST00000394299 PRLRP16471 622 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 ABCB4P21439 1286 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 MXI1P50539 228 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 MOGSQ13724 837 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 MEI1Q5TIA1 1274 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 LMBRD2Q68DH5 695 aaPredicted RBP16.35■□□□□ 0.21
GPC3-202ENST00000394299 BICD1Q96G01 975 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 ZBTB45Q96K62 511 aaPredicted RBP16.35■□□□□ 0.21
GPC3-202ENST00000394299 GDAP1L1Q96MZ0 367 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 FAM213AQ9BRX8 229 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 SYT11Q9BT88 431 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 LRRC1Q9BTT6 524 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 OSGEPQ9NPF4 335 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 EXOC7Q9UPT5 735 aa16.35■□□□□ 0.21
GPC3-202ENST00000394299 OTOFQ9HC10 1997 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 SPDYE5A6NIY4 337 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 OATP04181 439 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 H2AFZP0C0S5 128 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 TCP1P17987 556 aaKnown RBP16.34■□□□□ 0.21
GPC3-202ENST00000394299 EPHX2P34913 555 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 WNT7BP56706 349 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 SLC7A5Q01650 507 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 DRP2Q13474 957 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 H2AFVQ71UI9 128 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 TXLNBQ8N3L3 684 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 PROCA1Q8NCQ7 364 aaPredicted RBP16.34■□□□□ 0.21
GPC3-202ENST00000394299 MCPH1Q8NEM0 835 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 SOCS7O14512 581 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 DKC1O60832 514 aaKnown RBP eCLIP16.34■□□□□ 0.217e-13■■■■□ 22.5
GPC3-202ENST00000394299 CALCAP01258 141 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 MYBL2P10244 700 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 GJA5P36382 358 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 TMEM174Q8WUU8 243 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 FGD4Q96M96 766 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 ZCCHC17Q9NP64 241 aaKnown RBP16.34■□□□□ 0.21
GPC3-202ENST00000394299 FBXO40Q9UH90 709 aa16.34■□□□□ 0.21
GPC3-202ENST00000394299 CHORDC1Q9UHD1 332 aaPredicted RBP16.34■□□□□ 0.21
GPC3-202ENST00000394299 GGPS1O95749 300 aa16.33■□□□□ 0.2
GPC3-202ENST00000394299 EDN1P05305 212 aa16.33■□□□□ 0.2
GPC3-202ENST00000394299 GLRA2P23416 452 aa16.33■□□□□ 0.2
GPC3-202ENST00000394299 EDNRBP24530 442 aa16.33■□□□□ 0.2
GPC3-202ENST00000394299 MARK3P27448 753 aa16.33■□□□□ 0.2
GPC3-202ENST00000394299 CCDC181Q5TID7 509 aa16.33■□□□□ 0.2
GPC3-202ENST00000394299 VPS36Q86VN1 386 aa16.33■□□□□ 0.2
GPC3-202ENST00000394299 TRIM50Q86XT4 487 aa16.33■□□□□ 0.2
GPC3-202ENST00000394299 PPM1KQ8N3J5 372 aa16.33■□□□□ 0.2
GPC3-202ENST00000394299 TAS1R2Q8TE23 839 aa16.33■□□□□ 0.2
GPC3-202ENST00000394299 IFT74Q96LB3 600 aa16.33■□□□□ 0.2
GPC3-202ENST00000394299 KREMEN1Q96MU8 473 aa16.33■□□□□ 0.2
GPC3-202ENST00000394299 CEP89Q96ST8 783 aa16.33■□□□□ 0.2
GPC3-202ENST00000394299 PI4K2AQ9BTU6 479 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms