RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP34■■■■□ 3.03
CMTM4-202ENST00000394106 NAMPTP43490 491 aa34■■■■□ 3.03
CMTM4-202ENST00000394106 RNASELQ05823 741 aaKnown RBP34■■■■□ 3.03
CMTM4-202ENST00000394106 PPP2R5AQ15172 486 aa34■■■■□ 3.03
CMTM4-202ENST00000394106 HSCBQ8IWL3 235 aa34■■■■□ 3.03
CMTM4-202ENST00000394106 SMG8Q8ND04 991 aaKnown RBP34■■■■□ 3.03
CMTM4-202ENST00000394106 MICAL1Q8TDZ2 1067 aa34■■■■□ 3.03
CMTM4-202ENST00000394106 RSPH1Q8WYR4 309 aa34■■■■□ 3.03
CMTM4-202ENST00000394106 KIFAP3Q92845 792 aa34■■■■□ 3.03
CMTM4-202ENST00000394106 IFT74Q96LB3 600 aa34■■■■□ 3.03
CMTM4-202ENST00000394106 PNMA5Q96PV4 448 aa34■■■■□ 3.03
CMTM4-202ENST00000394106 C2orf40Q9H1Z8 148 aa34■■■■□ 3.03
CMTM4-202ENST00000394106 IGFLR1Q9H665 355 aa34■■■■□ 3.03
CMTM4-202ENST00000394106 RSAD1Q9HA92 442 aa34■■■■□ 3.03
CMTM4-202ENST00000394106 TBC1D13Q9NVG8 400 aa34■■■■□ 3.03
CMTM4-202ENST00000394106 PRMT7Q9NVM4 692 aaPredicted RBP34■■■■□ 3.03
CMTM4-202ENST00000394106 IPPQ9Y573 584 aa34■■■■□ 3.03
CMTM4-202ENST00000394106 PCDHGC5Q9Y5F6 944 aa34■■■■□ 3.03
CMTM4-202ENST00000394106 ITGA4P13612 1032 aa33.99■■■■□ 3.03
CMTM4-202ENST00000394106 LIG1P18858 919 aa33.99■■■■□ 3.03
CMTM4-202ENST00000394106 NCLP19338 710 aaKnown RBP33.99■■■■□ 3.03
CMTM4-202ENST00000394106 PPM1AP35813 382 aa33.99■■■■□ 3.03
CMTM4-202ENST00000394106 HYAL1Q12794 435 aa33.99■■■■□ 3.03
CMTM4-202ENST00000394106 RESTQ13127 1097 aa33.99■■■■□ 3.03
CMTM4-202ENST00000394106 CDR2LQ86X02 465 aaPredicted RBP33.99■■■■□ 3.03
CMTM4-202ENST00000394106 CNNM3Q8NE01 707 aa33.99■■■■□ 3.03
CMTM4-202ENST00000394106 URGCPQ8TCY9 931 aa33.99■■■■□ 3.03
CMTM4-202ENST00000394106 ADAMTS19Q8TE59 1207 aa33.99■■■■□ 3.03
CMTM4-202ENST00000394106 RUSC1Q9BVN2 902 aa33.99■■■■□ 3.03
CMTM4-202ENST00000394106 TRIM6Q9C030 488 aaPredicted RBP33.99■■■■□ 3.03
CMTM4-202ENST00000394106 TLR9Q9NR96 1032 aa33.99■■■■□ 3.03
CMTM4-202ENST00000394106 SPG21Q9NZD8 308 aa33.99■■■■□ 3.03
CMTM4-202ENST00000394106 CNTNAP2Q9UHC6 1331 aa33.99■■■■□ 3.03
CMTM4-202ENST00000394106 TCF20Q9UGU0 1960 aaKnown RBP33.98■■■■□ 3.03
CMTM4-202ENST00000394106 ZC3H11AO75152 810 aaKnown RBP eCLIP33.98■■■■□ 3.03
CMTM4-202ENST00000394106 SSBP05455 408 aaKnown RBP eCLIP33.98■■■■□ 3.03
CMTM4-202ENST00000394106 BMP1P13497 986 aa33.98■■■■□ 3.03
CMTM4-202ENST00000394106 GTF2F1P35269 517 aaKnown RBP eCLIP33.98■■■■□ 3.03
CMTM4-202ENST00000394106 BCAR1P56945 870 aa33.98■■■■□ 3.03
CMTM4-202ENST00000394106 HYIQ5T013 277 aa33.98■■■■□ 3.03
CMTM4-202ENST00000394106 CABP7Q86V35 215 aa33.98■■■■□ 3.03
CMTM4-202ENST00000394106 PPP2R3CQ969Q6 453 aa33.98■■■■□ 3.03
CMTM4-202ENST00000394106 PABPC5Q96DU9 382 aaKnown RBP33.98■■■■□ 3.03
CMTM4-202ENST00000394106 KIFC3Q9BVG8 833 aa33.98■■■■□ 3.03
CMTM4-202ENST00000394106 APOL6Q9BWW8 343 aa33.98■■■■□ 3.03
CMTM4-202ENST00000394106 NT5C3AQ9H0P0 336 aa33.98■■■■□ 3.03
CMTM4-202ENST00000394106 GBP3Q9H0R5 595 aa33.98■■■■□ 3.03
CMTM4-202ENST00000394106 CLDND1Q9NY35 253 aa33.98■■■■□ 3.03
CMTM4-202ENST00000394106 HES2Q9Y543 173 aa33.98■■■■□ 3.03
CMTM4-202ENST00000394106 ALDH7A1P49419 539 aaKnown RBP33.97■■■■□ 3.03
CMTM4-202ENST00000394106 PLCB3Q01970 1234 aa33.97■■■■□ 3.03
CMTM4-202ENST00000394106 TMEM132AQ24JP5 1023 aa33.97■■■■□ 3.03
CMTM4-202ENST00000394106 PPP4R3CPQ6ZMV5 832 aa33.97■■■■□ 3.03
CMTM4-202ENST00000394106 ADGRD2Q7Z7M1 963 aa33.97■■■■□ 3.03
CMTM4-202ENST00000394106 MRPS27Q92552 414 aaKnown RBP33.97■■■■□ 3.03
CMTM4-202ENST00000394106 AK8Q96MA6 479 aa33.97■■■■□ 3.03
CMTM4-202ENST00000394106 FZD8Q9H461 694 aa33.97■■■■□ 3.03
CMTM4-202ENST00000394106 PUF60Q9UHX1 559 aaKnown RBP33.97■■■■□ 3.03
CMTM4-202ENST00000394106 MTMR6Q9Y217 621 aa33.97■■■■□ 3.03
CMTM4-202ENST00000394106 CLIC4Q9Y696 253 aa33.97■■■■□ 3.03
CMTM4-202ENST00000394106 BRWD1Q9NSI6 2320 aa33.96■■■■□ 3.03
CMTM4-202ENST00000394106 NT5C1B-RDH14C9J2C7 533 aa33.96■■■■□ 3.03
CMTM4-202ENST00000394106 NPTXRO95502 500 aa33.96■■■■□ 3.03
CMTM4-202ENST00000394106 ERVFC1P60507 584 aa33.96■■■■□ 3.03
CMTM4-202ENST00000394106 KRT17Q04695 432 aa33.96■■■■□ 3.03
CMTM4-202ENST00000394106 RINT1Q6NUQ1 792 aa33.96■■■■□ 3.03
CMTM4-202ENST00000394106 FAM173BQ6P4H8 233 aa33.96■■■■□ 3.03
CMTM4-202ENST00000394106 SLC27A1Q6PCB7 646 aa33.96■■■■□ 3.03
CMTM4-202ENST00000394106 SLC39A11Q8N1S5 342 aa33.96■■■■□ 3.03
CMTM4-202ENST00000394106 PRIMPOLQ96LW4 560 aa33.96■■■■□ 3.03
CMTM4-202ENST00000394106 RNF39Q9H2S5 420 aa33.96■■■■□ 3.03
CMTM4-202ENST00000394106 NRDE2Q9H7Z3 1164 aa33.96■■■■□ 3.03
CMTM4-202ENST00000394106 CUL9Q8IWT3 2517 aa33.95■■■■□ 3.03
CMTM4-202ENST00000394106 NCK2O43639 380 aa33.95■■■■□ 3.03
CMTM4-202ENST00000394106 HIP1RO75146 1068 aa33.95■■■■□ 3.03
CMTM4-202ENST00000394106 PRKCBP05771 671 aa33.95■■■■□ 3.03
CMTM4-202ENST00000394106 AFF1P51825 1210 aaKnown RBP33.95■■■■□ 3.03
CMTM4-202ENST00000394106 GRIN1Q05586 938 aa33.95■■■■□ 3.03
CMTM4-202ENST00000394106 MAPK6Q16659 721 aa33.95■■■■□ 3.03
CMTM4-202ENST00000394106 FAM187BQ17R55 369 aa33.95■■■■□ 3.03
CMTM4-202ENST00000394106 RBM23Q86U06 439 aaKnown RBP33.95■■■■□ 3.03
CMTM4-202ENST00000394106 NXF3Q9H4D5 531 aaKnown RBP33.95■■■■□ 3.03
CMTM4-202ENST00000394106 UBN1Q9NPG3 1134 aa33.95■■■■□ 3.03
CMTM4-202ENST00000394106 LZTS1Q9Y250 596 aa33.95■■■■□ 3.03
CMTM4-202ENST00000394106 XIRP2A4UGR9 3374 aa33.94■■■■□ 3.02
CMTM4-202ENST00000394106 A0A1B0GUA9 196 aa33.94■■■■□ 3.02
CMTM4-202ENST00000394106 H3BQ06 376 aaPredicted RBP33.94■■■■□ 3.02
CMTM4-202ENST00000394106 STX6O43752 255 aa33.94■■■■□ 3.02
CMTM4-202ENST00000394106 UBA7P41226 1012 aa33.94■■■■□ 3.02
CMTM4-202ENST00000394106 PRPF4BQ13523 1007 aaKnown RBP33.94■■■■□ 3.02
CMTM4-202ENST00000394106 COL19A1Q14993 1142 aa33.94■■■■□ 3.02
CMTM4-202ENST00000394106 C1orf186Q6ZWK4 172 aa33.94■■■■□ 3.02
CMTM4-202ENST00000394106 CCDC113Q9H0I3 377 aa33.94■■■■□ 3.02
CMTM4-202ENST00000394106 USP20Q9Y2K6 914 aa33.94■■■■□ 3.02
CMTM4-202ENST00000394106 TTLL13PA6NNM8 815 aa33.93■■■■□ 3.02
CMTM4-202ENST00000394106 POMCP01189 267 aa33.93■■■■□ 3.02
CMTM4-202ENST00000394106 HSP90AA1P07900 732 aaKnown RBP33.93■■■■□ 3.02
CMTM4-202ENST00000394106 NRIP1P48552 1158 aa33.93■■■■□ 3.02
CMTM4-202ENST00000394106 CEBPZQ03701 1054 aaKnown RBP33.93■■■■□ 3.02
CMTM4-202ENST00000394106 LEXMQ3ZCV2 418 aa33.93■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms